Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq15420 127 3e-24 >seq15420 Length=311 Score = 127 bits (140), Expect = 3e-24 Identities = 198/282 (70%), Gaps = 1/282 (0%) Strand=Plus/Plus Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 |||||| |||| | || ||| || ||||| |||||||| |||||||| ||||| | || Sbjct 6 CCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC-AGGAA 64 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 || || | || | | || || || || ||||| || ||||||||| | | Sbjct 65 CAGGTCGCGGGCACGAGCCTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAA 124 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | |||| ||||| || |||| ||| ||||| | | | || || || ||||| || || Sbjct 125 GACGTCAGCGTGCCATGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 184 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||| || | ||| | ||| ||||| || | || | | ||| ||||| ||||||||||| Sbjct 185 CTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGATACCATTGGA 244 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT 63333 || || ||||| || | |||||| ||| ||||||| || Sbjct 245 CGTGCCGTTGGTGCCAGCAATATAGGAGCCAGTGGCACGGAT 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633403353892800