Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7444 93.3 9e-14 >seq7444 Length=1174 Score = 93.3 bits (102), Expect = 9e-14 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || || |||| || ||||||||||||||||| || || |||| ||||| || | Sbjct 698 AGTCGGCTCCTTGTCCGGAGGTTGGAAGATGAAGCTTGCACTAGCTCGTGCCATGCTGCA 639 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814 ||||| || || || ||||| ||||| ||||| ||||||||| | | ||| | || Sbjct 638 AAAGGCCGACGTTCTCCTCCTTGACGAGCCTACCAATCACATGGACGTCGCGAACATCGC 579 Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTCTCA 279871 |||| | | | |||||| | |||| ||| | | | | | ||||| ||||| Sbjct 578 CTGGTTGGAGAACTACCTGA--AGTC-GAACACCGAGATCACCAGTTTGATTGTGTCTCA 522 Query 279872 CGACTCTGGCTTCCTAGA 279889 ||||||||| ||||| || Sbjct 521 CGACTCTGGTTTCCTCGA 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027456632717988