Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq15420 132 9e-26 seq5788 123 5e-23 >seq15420 Length=311 Score = 132 bits (146), Expect = 9e-26 Identities = 144/190 (76%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 244983 TCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 ||||||||||| | || || | || ||||||||| ||||| |||||||| || ||| Sbjct 5 TCCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCA-GGA 63 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102 | ||||| | || | ||||||| ||| |||||||| ||| || | || || | Sbjct 64 ACAGGTCGCGGGCACGAGCCTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA 123 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 ||||||| ||||||| ||||||| ||||| |||| |||||||| ||||||||||| | Sbjct 124 AGACGTCAGCGTGCCATGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCAC 183 Query 245163 CCTGGTCCAC 245172 ||||||| || Sbjct 184 CCTGGTCGAC 193 >seq5788 Length=545 Score = 123 bits (136), Expect = 5e-23 Identities = 327/495 (66%), Gaps = 21/495 (4%) Strand=Plus/Plus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGAG-G 243934 ||| || |||||| |||||||| ||||| |||| || || || ||||| | || | Sbjct 31 GTTCAGCGACTGGGACTGGTCGATGAAGG-CGCCACGGTCGGCAGCCATCTGCACGATAG 89 Query 243935 TCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994 |||| |||||| || || | | |||||||| | | ||||| || || |||| | Sbjct 90 TCCT-CTGAGAGATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATGCTG 148 Query 243995 TCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 ||||||||| | ||||| | | | |||||| || | || || || |||| Sbjct 149 CGGATGTTCTGGATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCCTCAGACCAC 208 Query 244055 AGGCCCAAGCGCTCCAGCGCCT----CGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110 || || | | |||| ||| | |||| | | || || ||||| ||||| || Sbjct 209 AGACCACACTGGACCAGGTCCTTCAGCAACCAAGGG----TTGACAACCTGGAACTCACC 264 Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | ||||| || |||||||||| |||| | || ||||||| || ||| ||||||| Sbjct 265 AGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCC 324 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 || ||||||| || ||||| |||||||||| || ||||| ||||| | | ||| Sbjct 325 CAAGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGATGCC 384 Query 244231 GTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCG 244290 |||| || ||| | |||| | | |||||||||| |||| | | Sbjct 385 GTGCTCCTTGATCTTGGCCTTGAGGGCATCCCAGTCCCAC---------AGGTTGCTGGG 435 Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350 | | ||||||||||| |||| ||| |||||| ||| || ||||| || | Sbjct 436 AGTAACACCCCACATGTCGTACTGAAGCTCTCCCTTGGAGACAGGAGATCCCTCATACGA 495 Query 244351 CGGGTAGGGACCGTC 244365 || ||| |||||||| Sbjct 496 CGAGTAAGGACCGTC 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943998435199680