Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5788 159 4e-34 >seq5788 Length=545 Score = 159 bits (176), Expect = 4e-34 Identities = 324/478 (68%), Gaps = 6/478 (1%) Strand=Plus/Plus Query 113699 TGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG 113758 ||||| || ||||||||| ||||| || || ||||| | | | | | || | Sbjct 41 TGGGACTGGTCGATGAAGGCGCCACGGTCGGCAGCCATCTGCACGATAGTCCTCTGAGAG 100 Query 113759 ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG 113818 |||||||| || || |||| || ||| || ||||| ||||| ||| || ||| Sbjct 101 ATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATGCTGCGGATGTTCTGG 160 Query 113819 ATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTT 113878 ||||||||| || | || ||| | | ||||| |||| ||||| |||||| || Sbjct 161 ATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCCTCAGACCACAGACCACACTGG 220 Query 113879 TTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938 || |||| || | |||||||| |||||||| ||||| |||| | Sbjct 221 ACCAGGTCCTTCAGCAACCAAGGGTTGACAACCTGGAACTCACCAGCGAGCACACGTCGC 280 Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998 | ||||| |||| ||||| ||||| |||||||| ||||| |||||||| || | ||| Sbjct 281 TGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTC 340 Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058 ||||| ||||||||||| ||||| || | |||||| |||| || | ||| | || Sbjct 341 GAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGATGCCGTGCTCCTTGATCTTG 400 Query 114059 TCCTTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115 |||||||||| |||||||| | ||| ||| | | | | |||||| || || Sbjct 401 GCCTTGAGGGCATCCCAGTCCCACAGGTT--GCTGGGAGTAACAC-CCCACATGTCGTAC 457 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT 114173 || || || | |||| | || ||||||||| | | | ||| || || ||||||| Sbjct 458 TGAAGCTCTCCCTTGGAGACAGGAGATCCCTCATACGACGAGTAAGGACCGTCAACCT 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597138044953440