Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq15420 163 3e-35 seq5788 129 6e-25 >seq15420 Length=311 Score = 163 bits (180), Expect = 3e-35 Identities = 206/282 (73%), Gaps = 1/282 (0%) Strand=Plus/Minus Query 94045 GTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGC 94104 |||||| | | ||||||| || ||||| || || ||||| ||||| ||||| || Sbjct 295 GTCCACCGCATCCGTGCCACTGGCTCCTATATTGCTGGCACCAACGGCACGTCCAATGGT 236 Query 94105 CTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGG 94164 || | || |||||||| |||||||||||| | || |||||||| ||||||||||| Sbjct 235 ATCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGCAAC 176 Query 94165 AGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTC 94224 | | | || ||||||| |||| || ||||| |||||||| ||||| | ||| Sbjct 175 AAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCATGGCACGCTGACGTCTTCGAGTTC 116 Query 94225 ATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCT 94284 |||||||||| |||||||||||||| || || | ||| | ||||| ||| ||| Sbjct 115 CTCGACCTGCGGAAGAACCACGGCAAGGACGAGGCTCGTGCCCGCGACCTGTTC-CTGCT 57 Query 94285 CTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAAC 94326 |||||| | || || || || ||||| || || ||||| ||| Sbjct 56 CTCTGGATTCCCGATCTCTTCATGAAGCGTGTGGAGAAGAAC 15 >seq5788 Length=545 Score = 129 bits (142), Expect = 6e-25 Identities = 199/278 (72%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 95096 TGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGT 95155 |||| |||| ||||||||||| ||||| || |||||||| | ||||||||||||| | Sbjct 368 TGCTGATGGCGCCCATGCCCACTGCCTCGACCTCGCAGATCTTGGGCAACAACGAGTGCT 309 Query 95156 TCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCA 95215 |||| || | |||||||||| | ||| | | || |||||||| || || |||| || Sbjct 308 TCGAGCCTTACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGTGAGTTCCAGGTTG 249 Query 95216 TCAACAAGCACCTCCTACGGGACCTGACGT-CTCTG-GGTGTGTGGGGTGACAAGGTCAA 95273 ||||| | || ||||||| || | || ||| ||||| ||| | | || Sbjct 248 TCAACCCTTGGTTGCTGAAGGACCTG--GTCCAGTGTGGTCTGTGGTCTGAGGACTTGAA 191 Query 95274 GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA-AATACCGGAGGACA 95332 ||||| | | || | |||||| |||||||||| ||||| || || || |||| Sbjct 190 GAACCGCATCATCGCCGAGGATGGCTCCATCCAGAACAT-CCGCAGCATCCCTGATGACA 132 Query 95333 TCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 ||||||| || |||||||| || ||||| ||| | ||| Sbjct 131 TCAAGGCTCTGTACAAGACAGTCTGGGAAATCTCTCAG 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494544679133280