Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5788 129 9e-25 >seq5788 Length=545 Score = 129 bits (142), Expect = 9e-25 Identities = 297/442 (67%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 ||||||||||||||| |||||| ||||||||||| |||||| || || || ||||| | Sbjct 22 CATGTGAATGTTCAGCGACTGGGACTGGTCGATGAA-GGCGCCACGGTCGGCAGCCATCT 80 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAG 204083 | || ||| |||| || || ||||| || |||||| ||| | || ||| | || Sbjct 81 GCACGATAGTCCTCTGAGAGATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAG 140 Query 204084 GCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCC 204142 | | || | | || ||| || ||||| | ||||| || | | || || ||| Sbjct 141 GGATG-CTGCGGATGTTCTGGATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCC 199 Query 204143 TCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAG 204202 || ||||| || || || ||| ||| || || ||||||| | ||| || Sbjct 200 TCAGACCACAGACCACACTGGACCAGGTCCTTCAGCAACCAAGGGTTGACAACCTGGAAC 259 Query 204203 TCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTG 204262 || || | ||||| | ||| | | | |||| |||| | || ||||| ||||||| Sbjct 260 TCACCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTG 319 Query 204263 TTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGC 204322 ||||| || ||||| | ||| ||| ||||||||||| |||| |||| | |||||| Sbjct 320 TTGCCCAAGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGG 379 Query 204323 ACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTC 204382 | |||| | | || | || ||| || | |||||| || ||||| | Sbjct 380 ATGCCGTGCTCCTTGATCTTGGCCTTGAGGGCATCCCAGTCCCACAGGTTGCTGGGAGTA 439 Query 204383 ACGCCCCACATGTCGAACTGAA 204404 || |||||||||||| |||||| Sbjct 440 ACACCCCACATGTCGTACTGAA 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794868268246080