Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq15009 114 1e-20 seq2256 84.2 2e-11 >seq15009 Length=544 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || || |||||| | || || ||| | |||||| | | Sbjct 502 TTCGTGAAGACCCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 443 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| |||||| | ||||||||||| || Sbjct 442 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGCGCCT 384 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| || Sbjct 383 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAA 324 Query 38432 GG 38433 || Sbjct 323 GG 322 >seq2256 Length=755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/145 (73%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357 ||||||| ||||||||| || || || | |||| |||||| | ||||| |||| Sbjct 1 TGCCGTCCGAGGCGGCGAAGAATGCGAGGATGTGCGAGATGAAGTATTTCTCGTCATCGT 60 Query 133358 TCAAGCGCT---CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414 | | || | |||||||| || | |||||||||||||| | ||||| ||||||| | Sbjct 61 TGAGACGGTTTTCCCAGTCGTGCATATCCTTGGACAGGTCGATTTCCTCAGCGGTCCAGA 120 Query 133415 ACGACGCCTCGGCTTTTTTGTACAT 133439 | || |||||| || |||||||| Sbjct 121 AGGAAGCCTCGTGCTTCTTGTACAT 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499992312645120