Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5788 138 1e-27 >seq5788 Length=545 Score = 138 bits (152), Expect = 1e-27 Identities = 244/352 (69%), Gaps = 4/352 (1%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| |||||| ||||| |||||||| ||||| || || ||||| | | |||| Sbjct 31 GTTCAGCGACTGGGACTGGTCGATGAAGGCGCCACGGTCGGCAGCCATCTGCACGATAGT 90 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 | | || ||||||||||| |||||||||| | |||||| ||||| || ||| Sbjct 91 CCTCTGAGAGATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATGCTGCG 150 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 |||||| || || |||||| | | | ||| | | ||||| || | ||||| || Sbjct 151 GATGTTCTGGATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCCTCAGACCACAG 210 Query 109680 ACCGACCTTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCAGCA 109737 ||| || || || | || ||| | | |||||| || || |||||||| Sbjct 211 ACCACACTGGACCAGGTCCTTCAGCAACCAAGG--GTTGACAACCTGGAACTCACCAGCG 268 Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797 || ||||| |||||||||| | ||||| || ||||| ||||| |||||||| | | Sbjct 269 AGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAG 328 Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGA 109849 || || | || || || ||||||||||| ||||| || | ||||| |||| Sbjct 329 ATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGA 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588763468010400