Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5788 140 6e-28 >seq5788 Length=545 Score = 140 bits (154), Expect = 6e-28 Identities = 253/365 (69%), Gaps = 10/365 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 |||||| ||||| |||||| ||||| | | | | ||| || ||||| | | |||| Sbjct 31 GTTCAGCGACTGGGACTGGTCGATGAAGGCGCCACGGTCGGCAGCCATCTGCACGATAGT 90 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 ||||| |||| ||||| || |||||| | | | |||| ||| || |||| || | | Sbjct 91 CCTCTGAGAGATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATGCTGCG 150 Query 212816 GATGTTCTGCACAGACCC--CCTGTGT-ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 ||||||||| | || || ||| | ||| | | | | || |||||| ||| Sbjct 151 GATGTTCTGGATGGAGCCATCCTCGGCGATGATGCGGTTCTT---CAAGTCCTCAGACCA 207 Query 212873 GAGGCCCC--TGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCT 212930 || || | ||| | |||| ||| | || ||||||||| | |||||| ||||| Sbjct 208 CAGACCACACTGGAC--CAGGTCCTTCAGCAACCAAGGGTTGACAACCTGGAACTCACCA 265 Query 212931 GAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCC 212990 | |||||| | | |||||| | ||| || ||||| ||||||| || ||||||||| ||| Sbjct 266 GCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCC 325 Query 212991 AGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCG 213050 | ||||| | || ||| ||||||||||| |||| ||| | ||||| | | ||| Sbjct 326 AAGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGATGCCG 385 Query 213051 TGCTC 213055 ||||| Sbjct 386 TGCTC 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931196656389120