Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq15420 118 2e-21 seq5788 100 5e-16 >seq15420 Length=311 Score = 118 bits (130), Expect = 2e-21 Identities = 126/165 (76%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096 || ||||||||| || || ||||| || || ||| || || | || || ||| || Sbjct 30 CTTCATGAAGAGATCGGGAATCCAGAGAGCAGGAAC-AGGTCGCGGGCACGAGCCTCGTC 88 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 | ||||| ||| |||| ||| || | ||||| || | |||||||||||| |||||||| Sbjct 89 CTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACGTCAGCGTGCCATGGCTCCAG 148 Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 |||| ||| | ||||||||| ||||||||||||||||| || || Sbjct 149 GTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCCTGGTCGAC 193 >seq5788 Length=545 Score = 100 bits (110), Expect = 5e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | |||||| | | |||||| | ||| || ||| | || Sbjct 244 GTTGACAACCTGGAACTCACCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGG 303 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||||||||||| |||||| | || ||| ||||||||||| |||| Sbjct 304 CTCGAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCAT 363 Query 221236 CAGCAGACTGTTGCG 221250 ||||| |||||||| Sbjct 364 CAGCAAGCTGTTGCG 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928509626353920