Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq15009 143 4e-29 seq13146 113 6e-20 >seq15009 Length=544 Score = 143 bits (158), Expect = 4e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| ||||| ||||| || || || ||||||||||| ||||| ||||| || ||||| || Sbjct 503 CTTCGTGAAGACCCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCAT 444 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| ||| |||| |||||||| || || ||||| |||||||| || || || || || || Sbjct 443 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGCGCCT 384 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || ||||| || ||||| | || |||||| | || || Sbjct 383 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAA 324 Query 172050 GG 172051 || Sbjct 323 GG 322 >seq13146 Length=366 Score = 113 bits (124), Expect = 6e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 ||||| || | || ||||| || ||||| |||||||| || | ||| || || || || Sbjct 357 GAGATCATTGCCAACGACCAGGGCAACCGCACAACTCCTTCCTTCGTCGCTTTCACCGAC 298 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | || ||||| ||||||||||||| || || ||| || |||||||| ||| || Sbjct 297 ACCGAGCGTCTGATTGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAACACC 238 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTT 195516 ||||| ||||||||||| | |||||||||||||| Sbjct 237 GTCTTCGACGCGAAGCGGTTGATTGGTCGCAAGTT 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657625010352960