Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq15420 109 2e-18 seq5201 109 2e-18 >seq15420 Length=311 Score = 109 bits (120), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||| || | |||||| |||||||| || || | ||| || | |||| || ||| Sbjct 83 CTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACGTCAGCGTGCCATGG 142 Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085 |||||| || || || ||| || | | | ||||||||||| || || || ||||| Sbjct 143 CTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGC 202 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| || |||||||||| ||||| ||||| ||||||||||| ||||| ||||| || Sbjct 203 AGTGTTGTTGAAGACACGGAGCATGGGAATGATACCATTGGACGTGCCGTTGGTGCCAGC 262 Query 156146 AATATGCGAACCAG 156159 ||||| || |||| Sbjct 263 AATATAGGAGCCAG 276 >seq5201 Length=1474 Score = 109 bits (120), Expect = 2e-18 Identities = 184/263 (70%), Gaps = 5/263 (2%) Strand=Plus/Minus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| | |||||| || ||||||||||| || | || || |||||||| || || Sbjct 1472 CTTGACAAGACGACGTTGGATATAACCAGTCTCAGCAG-CTTGACTGCTGTATCGATCAG 1414 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATA 302700 ||| | | |||| |||| || |||||||| | || | |||| | || | | Sbjct 1413 ACCCTCTCTACCAGCCATGGCGTGGAAGAAGAATTCAGTAGGGGTC--AAGCCACGGAGG 1356 Query 302701 AAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGC 302760 | ||| |||| ||||||||||| ||||||||||| | |||| |||||| || || || Sbjct 1355 TACGAGTTCTCCACGAAACCACGGGCCTCGGGCGAGTAGTCGTCCTTGGTGAAATGAGGG 1296 Query 302761 AGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGG 302820 || || | || || ||||| | || |||||||| || || ||| |||||| || | Sbjct 1295 AGAGTACGGTAGCCAAAGCCGAAGGGAATACGCTTGCCCTCCACGACCTGCTGACCAACC 1236 Query 302821 CACGAAATCATCTGCGAAATATT 302843 | | ||||||| ||||| || Sbjct 1235 AGAGCAGTCATCTGGGAAATGTT 1213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471273216984516