Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5788 122 8e-23 seq15009 96.9 3e-15 seq15420 86.0 6e-12 >seq5788 Length=545 Score = 122 bits (134), Expect = 8e-23 Identities = 285/428 (67%), Gaps = 4/428 (1%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTT 148109 ||||||| |||||| ||||| ||||||||||| || ||||| | | || ||| | Sbjct 37 CGACTGGGACTGGTCGATGAAGGCGCCACGGTCGGCAGCCATCTGCACGATAGTCCTCTG 96 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | || |||||| | ||||||||||| |||||| | ||| || |||| | |||| Sbjct 97 AGAG--ATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATGCTGCGGATG 154 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | ||||| | || | || | || || || || | | || Sbjct 155 TTCTGGATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCCTCAGACCACAGACCA 214 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || || |||||| | | || | | || || ||||| ||||| || |||||||| Sbjct 215 CACTGGACCAGGTCCTTCAGCAACCAAGGGTTGACAACCTGGAACTCACCAGCGAGCACA 274 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || || || |||||||||||||||| |||||| Sbjct 275 CGTCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGC 334 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||||| || ||||||||| ||| | ||||| |||||| | ||| | | || Sbjct 335 GAGGTCGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGATGCCGTGCTCCTTG 394 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| || || |||||||||| || || || || |||||||||| Sbjct 395 ATCTTGGCCTTGAGGGCATCCCAGTCCCACAGGTTGCTGGGAGTAACACCCCACATGTCG 454 Query 148470 TACTGCAG 148477 ||||| || Sbjct 455 TACTGAAG 462 >seq15009 Length=544 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 357 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTG 416 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| || | ||||| Sbjct 417 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 476 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || || || ||||| || || ||||| Sbjct 477 GTCTTACCCGTCAGGGTCTTCACGAA 502 >seq15420 Length=311 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/255 (69%), Gaps = 10/255 (4%) Strand=Plus/Plus Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC--GTAC 149183 |||| |||||| | | ||| |||||||| || |||||||| | |||||| || | || Sbjct 6 CCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAGGAAC 65 Query 149184 ATGAGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242 | ||||||| || | || || || ||| ||| ||||||| ||| | Sbjct 66 A---GGTCGCGGGCACGAGCC-TCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTC 121 Query 149243 GAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CC 149299 ||| | ||| |||||||| ||||| | ||| | |||| ||||| |||||| || Sbjct 122 GAAGACGTCAGCGTGCCATGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCC 181 Query 149300 GCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACT 149359 ||||||||||||| ||| | ||||||| || || || | ||| || || ||| | Sbjct 182 ACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGATACCATT 241 Query 149360 GGCAGTGCCGTTAGT 149374 || |||||||| || Sbjct 242 GGACGTGCCGTTGGT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483246357604320