Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4921 170 3e-36 >seq4921 Length=358 Score = 170 bits (188), Expect = 3e-36 Identities = 218/296 (74%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 || || || || || ||| || | |||||||| ||||| || |||||| | ||||||| Sbjct 36 TGCGCATCCGTCAGCCGCGCATACCGCAGGATCGCACACCGCGACTGCAGCGGCTCGATG 95 Query 332912 ACC--ATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCA 332969 | | |||| | |||||| || | || ||||||||||||||| ||| | |||| Sbjct 96 ATCTTATTGCT--CTGGTTGCACGCAAACGCGAACCGCGTCGTATTGCTATAAATCTCCA 153 Query 332970 TGGTCGACCGGAGGGCCTGTTGGGCCGCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATG 333028 | || || || ||||| || | |||||| ||| | || ||| |||||||| | ||| Sbjct 154 TCGTGCGGCGCAGCGCCTGCTGCG-CGCCGGACGTCATGCTGTCCGCCTCGTCCAAAATG 212 Query 333029 ATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATC 333088 | || ||||||||| ||| | ||||| ||| | ||| ||| | |||||| Sbjct 213 ACGAGCTTGTGGCGGCCGGGAGGCAGCGTGACCTTCTTCTGCGCGAAGCCCTTGATGCGG 272 Query 333089 TTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTC 333144 ||||||||||| || | |||||||||||||||||||||||||||||||||||| || Sbjct 273 TTGCGCACGACATCGATGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCTTC 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175026828340616