Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq15420 91.5 2e-13 >seq15420 Length=311 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/245 (69%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || ||||| || |||||||||||||| ||||| | || || || | || | | Sbjct 25 ACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC-AGGAACAGGTCGCGGGCACGAGCC 83 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || || ||||| ||||| | | |||| |||||||| Sbjct 84 TCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACGTCAGCGTGCCATGGC 143 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || || || | | || || || || || || ||||| || | ||| | ||| Sbjct 144 TCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCA 203 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 ||||| || |||| | ||||| ||||| |||||||| || | || || || |||| | Sbjct 204 GTGTTGTTGAAGACACGGAGCATGGGAATGATACCATTGGACGTGCCGTTGGTGCCAGCA 263 Query 69835 ATATA 69839 ||||| Sbjct 264 ATATA 268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686660928959520