Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5788 141 1e-28 >seq5788 Length=545 Score = 141 bits (156), Expect = 1e-28 Identities = 271/394 (69%), Gaps = 8/394 (2%) Strand=Plus/Plus Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAG-ATATTCTG 110583 |||||||| ||||| || ||| |||||| ||||| ||||| ||| | || ||||| Sbjct 101 ATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATG-CTGCGGATGTTCTG 159 Query 110584 GATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTT 110643 |||||| || || | | ||| | | ||||| |||| ||||| |||||| || Sbjct 160 GATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCCTCAGACCACAGACCACACTG 219 Query 110644 CTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCT 110703 ||||| || | | |||||||| |||||||| ||||| | || Sbjct 220 GACCAGGTCCTTCAGCAACCAAGGGTTGACAACCTGGAACTCACCAGCGAGCACACGTCG 279 Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 | |||||||||| | ||||| || || ||||| || || || |||||||| || | ||| Sbjct 280 CTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGCGAGGT 339 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 ||||| || ||||| || ||||||| | ||||| || | || | ||||||||| Sbjct 340 CGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGATGCCGTGCTCCTTGATCTT 399 Query 110824 TTCCTTGAGAACATCCCAGTCGTA---GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880 ||||||| |||||||||| | ||| ||| || | | | |||||||||| | Sbjct 400 GGCCTTGAGGGCATCCCAGTCCCACAGGTT--GCTGGGAGT-AACACCCCACATGTCGTA 456 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCA 110914 ||||||| | || | ||| | ||||| |||||| Sbjct 457 CTGAAGCTCTCCCTTGGAGACAGGAGATCCCTCA 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627805374652800