Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5788 145 9e-30 seq15420 86.0 8e-12 >seq5788 Length=545 Score = 145 bits (160), Expect = 9e-30 Identities = 260/380 (68%), Gaps = 0/380 (0%) Strand=Plus/Plus Query 117939 TGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG 117998 ||||| || ||||||||| || || || || ||||| | | | | | || | Sbjct 41 TGGGACTGGTCGATGAAGGCGCCACGGTCGGCAGCCATCTGCACGATAGTCCTCTGAGAG 100 Query 117999 ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG 118058 |||||||| || ||| |||| || ||| || ||||| ||||| ||| || ||| Sbjct 101 ATTTCCCAGACTGTCTTGTACAGAGCCTTGATGTCATCAGGGATGCTGCGGATGTTCTGG 160 Query 118059 ATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTT 118118 ||||| ||| || | || ||| | | ||||| |||| ||||| |||||| || Sbjct 161 ATGGAGCCATCCTCGGCGATGATGCGGTTCTTCAAGTCCTCAGACCACAGACCACACTGG 220 Query 118119 TTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178 || |||| || | |||||||| |||||||| ||||| |||| | Sbjct 221 ACCAGGTCCTTCAGCAACCAAGGGTTGACAACCTGGAACTCACCAGCGAGCACACGTCGC 280 Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238 | ||||| |||| ||||| ||||| |||||||| ||||| |||||||| || | || Sbjct 281 TGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTC 340 Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298 ||||| ||||||||||| ||||| || | |||||| |||| || | ||| | || Sbjct 341 GAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTTGCGGATGCCGTGCTCCTTGATCTTG 400 Query 118299 TCCTTGAGAGCGTCCCAGTC 118318 ||||||| || |||||||| Sbjct 401 GCCTTGAGGGCATCCCAGTC 420 >seq15420 Length=311 Score = 86.0 bits (94), Expect = 8e-12 Identities = 157/228 (69%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 119027 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 119086 || ||| || |||||||||||||| || || |||||||| || | ||| || || || Sbjct 18 CTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAG-GAACAGGTCGCGGGC 76 Query 119087 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 119146 ||||| || || | || || || |||| || | || || | || || ||||| Sbjct 77 ACGAGCCTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACGTCAGCGTG 136 Query 119147 CCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAGCCTGGTTTACATA 119203 ||| || |||||||| | |||| | || ||| ||| |||||| || || Sbjct 137 CCATGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCCTGGTCGACGTA 196 Query 119204 CCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251 | |||||| ||| || ||||| ||||| ||||||||||||| ||| Sbjct 197 GCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGATACCATTGGA 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618212037658080