Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq15420 120 4e-22 >seq15420 Length=311 Score = 120 bits (132), Expect = 4e-22 Identities = 171/239 (72%), Gaps = 10/239 (4%) Strand=Plus/Minus Query 104532 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTG 104591 ||||||| ||||| ||||| || || || ||| ||| || ||||| || | || | || Sbjct 240 ATGGTATCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTG 181 Query 104592 G------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 104645 | ||||| || || |||| |||| || |||||||||||||| || || Sbjct 180 GCAACAAGCGTCCC---GGCGCTTTCGCCATCTACCTGGAGCCATGGCACGCTGACGTCT 124 Query 104646 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCT 104705 | |||||||| || |||| ||||| || | || ||||| || |||||| || | Sbjct 123 TCGAGTTCCTCGACCTGCGGAAGAACCACGGCAAGGACGAGGCTCGTGCCCGCGACCTGT 64 Query 104706 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764 || | |||||||||||||| ||||||||||||||| | || ||| ||| ||| | ||| Sbjct 63 TC-CTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTGGAGAAGAACGGCGAGTGG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583050330340320