Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq15420 165 9e-36 seq5788 138 1e-27 >seq15420 Length=311 Score = 165 bits (182), Expect = 9e-36 Identities = 194/260 (75%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 79351 AGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCC 79410 |||| ||| || ||| |||||| || || ||||||||| || || ||||| || || Sbjct 2 AGGT-CCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCA 60 Query 79411 GTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAG 79470 | ||| ||||||||| ||| ||| || | ||| |||||| ||||| ||||| || Sbjct 61 G-GAACAGGTCGCGGGCACGAGCCTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAAC 119 Query 79471 TCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCG 79530 || | || ||| |||||||| |||||||| ||||||||||| | || |||||| | Sbjct 120 TCGAAGACGTCAGCGTGCCATGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTG 179 Query 79531 CCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCG 79590 || ||||||| |||||| || || ||||||||||| || ||||||||||| | ||| || Sbjct 180 CCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGATACCA 239 Query 79591 TCGGCGACGCCGTTCGTCCC 79610 | || |||||| || || Sbjct 240 TTGGACGTGCCGTTGGTGCC 259 Score = 158 bits (174), Expect = 1e-33 Identities = 180/239 (75%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 |||||| | || |||||||| |||||||||||||| || | |||||| ||||||| ||| Sbjct 238 GGTATCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGC 179 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || ||| | |||||||||||||| |||||||||||||| |||||| | || Sbjct 178 AACAAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCATGGCACGCTGACGTCTTCGAG 119 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 |||||||| ||||| |||||| || | || ||| || |||||||| ||| | Sbjct 118 TTCCTCGACCTGCGGAAGAACCACGGCAAGGACGAGGCTCGTGCCCGCGACCTGTTC-CT 60 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 || | |||||||| || || |||||| || || |||||| ||| || ||| |||| Sbjct 59 GCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTGGAGAAGAACGGCGAGTGG-ACCT 2 >seq5788 Length=545 Score = 138 bits (152), Expect = 1e-27 Identities = 335/495 (68%), Gaps = 23/495 (5%) Strand=Plus/Minus Query 20240 GCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTC 20299 ||||| | ||||| || ||| | ||| |||| || || | ||| |||| || Sbjct 519 GCCAAGGTTGACGGTCCTTACTCGTCGTATGAGGGATCTCCTGTCTCCAAGGGAGAGCTT 460 Query 20300 CAGCCGGACATGTGGGGCGTCACTG--AGAA-----TGAGTTTTGGAGCGCCCTCAAGGT 20352 ||| ||||||||||| || ||| || | || | | ||| |||||||||| Sbjct 459 CAGTACGACATGTGGGGTGTTACTCCCAGCAACCTGTGGGACTGGGAT-GCCCTCAAGGC 401 Query 20353 TGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTC 20412 |||||||| ||||| | |||||| ||||| | ||||||||||| || ||||| Sbjct 400 CAAGATCAAGGAGCACGGCATCCGCAACAGCTTGCTGATGGCGCCCATGCCCACTGCCTC 341 Query 20413 GACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTT 20472 |||| | |||||| |||| ||||||||| |||||||| ||||| ||||||||||| Sbjct 340 GACCTCGCAGATCTTGGGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCA 281 Query 20473 GCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGT--CCG--CGACT 20528 ||| ||| || || ||||||||| || ||| ||| | | |||| | | ||| Sbjct 280 GCGACGTGTGCTCGCTGGTGAGTTC--CA-GGTTGTCAA-CCCTTGGTTGCTGAAGGACC 225 Query 20529 TGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCGGCGG 20586 || || | | ||||||| | | ||||| || | ||||| | || Sbjct 224 TGGTCCAGTGTGGTCTGTGGTCTGAGGACTTGAAGAACCGCATCATCGCCGAG--GATGG 167 Query 20587 GAGCGTCCAG-GCATTGG--ATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATG 20643 | ||||| ||| | ||||| | || |||||| | |||| ||| || || Sbjct 166 CTCCATCCAGAACATCCGCAGCATCCCTGATGACATCAAGGCTCTGTACAAGACAGTCTG 107 Query 20644 GGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCA 20703 ||||||| | |||| || ||| | | ||||| ||||| || ||||||| ||||||||| Sbjct 106 GGAAATCTCTCAGAGGACTATCGTGCAGATGGCTGCCGACCGTGGCGCCTTCATCGACCA 47 Query 20704 GTCCCAGTCGCTCAA 20718 |||||||||||| || Sbjct 46 GTCCCAGTCGCTGAA 32 Score = 104 bits (114), Expect = 3e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 |||||| || || || || ||| |||||||||||| ||||| |||||||| ||| Sbjct 256 GAACTCACCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTC 315 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||||| |||| |||||| | ||||||||| || |||||||| || | ||| | || Sbjct 316 GTTGTTGCCCAAGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCATCAGCAAGCTGTT 375 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCA 78668 || | || ||| |||||||| | |||| ||| | ||||| Sbjct 376 GCGGATGCCGTGCTCCTTGATCTTGGCCTTGAGGGCATCCCA 417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548326864825920