Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq15009 131 2e-25 seq15420 123 3e-23 >seq15009 Length=544 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || || |||||||| || |||||||| ||||| || | ||| Sbjct 503 CTTCGTGAAGACCCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCAT 444 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||||| || || |||||||||||||| ||||| |||||||| ||||| || Sbjct 443 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGCGCCT 384 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| | ||||| || |||| || Sbjct 383 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAA 324 Query 27594 GG 27595 || Sbjct 323 GG 322 >seq15420 Length=311 Score = 123 bits (136), Expect = 3e-23 Identities = 187/263 (71%), Gaps = 11/263 (4%) Strand=Plus/Plus Query 81202 AGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCG 81261 |||| ||| ||| || ||||| ||| ||||||||| || || |||||||| || Sbjct 2 AGGT-CCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCA 60 Query 81262 GTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAG 81321 | ||||||||||||| || ||||| || | || ||||| |||| ||||| || Sbjct 61 G-GAACAGGTCGCGGGCACGAGCCTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAAC 119 Query 81322 TCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG---- 81377 || | || ||| || |||||||||||||| || | ||||| | || | |||| Sbjct 120 TCGAAGACGTCAGCGTGCCATGGCTCCAGGTAGATGGCGAAAGCGCC---GGGACGCTTG 176 Query 81378 --GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATA 81435 ||||||||||| |||||| || ||||| ||| || ||||| | ||| || |||||| Sbjct 177 TTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGATA 236 Query 81436 CCATCTGACTGACCGTTCGTACC 81458 |||| ||| ||||| || || Sbjct 237 CCATTGGACGTGCCGTTGGTGCC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570104603492160