Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq15009 116 9e-21 seq4 86.0 1e-11 >seq15009 Length=544 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | || | ||||| || |||||||| || |||||||| Sbjct 324 TTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 383 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 384 AGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 443 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| || | ||||| || | ||||| ||||| ||||||| || || | ||| Sbjct 444 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGGGTCTTCACGAA 502 >seq4 Length=7429 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 371385 TAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAGTTTATAGCGCCTAGAAGAGA 371444 || ||||||| ||||||||| | ||| ||||||||||| || || || ||||||||| Sbjct 5849 TATACCAGGTGTTCTCATATTTACTATAGTAGTAATAAAATTAATTGCCCCTAGAAGACT 5790 Query 371445 AGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCGAC 371486 | |||||||| | |||||| |||||| |||||||| || Sbjct 5789 ACTTATACCTGATAAGTGTAAAGCAAATATAGCTAAATCCAC 5748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192090116994392