Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq15009 165 2e-35 seq18377 87.8 4e-12 >seq15009 Length=544 Score = 165 bits (182), Expect = 2e-35 Identities = 144/179 (80%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| |||||||||||||| || || || ||||| |||||| Sbjct 324 TTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 383 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || |||||||| ||||| ||||||||||| |||||||| || || ||| | ||| Sbjct 384 AGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 443 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| |||| || || || || ||||| ||||||||||||| ||||| ||||| Sbjct 444 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGGGTCTTCACGAA 502 >seq18377 Length=446 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | ||| |||| || || | ||| || || ||||| ||||||||| Sbjct 216 GGGAAACCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGCGTTGACTTTCCAGCACCA 157 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||||| ||||| ||||| || ||| ||| |||| | | |||| |||| || Sbjct 156 TTGGGTCCGCACAGACCGTAGCGACGTCCACGGATCAGCCTCAGCTTGGTGGTGTTGAGC 97 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| |||| || || |||||||||||| || || ||| |||| || Sbjct 96 AGAATCTTGGCACCGTAGGCGAGAGAGAACTCAGTCTCGCAAAGGACCTCACC 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046352041263672