Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 109 6e-19 seq78 89.7 6e-13 >seq1 Length=6660791 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| |||| || ||||| ||||| ||||| || |||||| || | Sbjct 5934738 ACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACC 5934679 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||||||||| || ||||| ||||||||||| | || | | |||||| Sbjct 5934678 GTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTT 5934619 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| |||||| |||| ||| | | | |||||| || || || || | ||| | Sbjct 5934618 ATCCTGGATTTTGGACTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGCGTAA 5934560 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || ||||| || || || ||||| Sbjct 5934559 TAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 5934523 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| | || || || |||| || |||||||| || ||||| Sbjct 5934486 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAA 5934427 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 5934426 AATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATT 5934367 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || ||| || ||||| |||| ||||| || ||||| || || ||||| || Sbjct 5934366 GTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGAC 5934307 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 5934306 GAAGATCTGCAT 5934295 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || | ||| || || | || || |||||||| ||||| || | Sbjct 1522955 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1522896 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 1522895 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1522836 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | ||||| || || || || | |||||||| |||||||| || ||||| || | Sbjct 1522835 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1522776 Query 43174 A 43174 | Sbjct 1522775 A 1522775 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || |||||||| |||||||| Sbjct 5934258 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 5934199 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||||| || | || |||||||||| ||| | || | |||| Sbjct 5934198 AATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGACAT 5934140 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | || ||| || || || |||| |||||||| ||||| || Sbjct 5934139 TGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 5934091 >seq78 Length=2267730 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||| || || | || || |||||||| || || || Sbjct 1891591 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 1891650 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 1891651 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1891709 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || ||||| || | ||||| || || ||||| || ||||| | Sbjct 1891710 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGA 1891769 Query 43171 CAAAGATTTGCATTTT 43186 | || || ||||| || Sbjct 1891770 CGAAAATCTGCATCTT 1891785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816677944120