Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29]
129 sequences; 34,681,960 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 6e-19
seq78 89.7 6e-13
>seq1
Length=6660791
Score = 109 bits (120), Expect = 6e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| ||||| |||| || ||||| ||||| ||||| || |||||| || |
Sbjct 5934738 ACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACC 5934679
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||||||||| || ||||| ||||||||||| | || | | ||||||
Sbjct 5934678 GTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTT 5934619
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| |||||| |||| ||| | | | |||||| || || || || | ||| |
Sbjct 5934618 ATCCTGGATTTTGGACTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGCGTAA 5934560
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || ||||| || || ||||| || || || |||||
Sbjct 5934559 TAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 5934523
Score = 104 bits (114), Expect = 3e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||| | || || || |||| || |||||||| || |||||
Sbjct 5934486 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAA 5934427
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | | |||||||||| ||| || |||| |
Sbjct 5934426 AATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATT 5934367
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || ||| || ||||| |||| ||||| || ||||| || || ||||| ||
Sbjct 5934366 GTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGAC 5934307
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 5934306 GAAGATCTGCAT 5934295
Score = 84.2 bits (92), Expect = 3e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || | ||| || || | || || |||||||| ||||| || |
Sbjct 1522955 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1522896
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 1522895 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1522836
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||| || || || || | |||||||| |||||||| || ||||| || |
Sbjct 1522835 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1522776
Query 43174 A 43174
|
Sbjct 1522775 A 1522775
Score = 82.4 bits (90), Expect = 9e-11
Identities = 121/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || | || || |||||||| ||||||||
Sbjct 5934258 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 5934199
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || ||||||||||||| || | || |||||||||| ||| | || | ||||
Sbjct 5934198 AATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGACAT 5934140
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | || ||| || || || |||| |||||||| ||||| ||
Sbjct 5934139 TGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 5934091
>seq78
Length=2267730
Score = 89.7 bits (98), Expect = 6e-13
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || ||| || || | || || |||||||| || || ||
Sbjct 1891591 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 1891650
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 1891651 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1891709
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || ||||| || | ||||| || || ||||| || ||||| |
Sbjct 1891710 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGA 1891769
Query 43171 CAAAGATTTGCATTTT 43186
| || || ||||| ||
Sbjct 1891770 CGAAAATCTGCATCTT 1891785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816677944120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |