Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq67 136 4e-27 seq1 114 1e-20 seq78 95.1 1e-14 >seq67 Length=3269952 Score = 136 bits (150), Expect = 4e-27 Identities = 360/537 (67%), Gaps = 17/537 (3%) Strand=Plus/Minus Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591 |||||||| |||||| | || || | || ||||||| || ||||| | |||| Sbjct 786010 TCAACGCTATTGACACCATCCCTTGCATCCGTAAAAAGGCCGACTGGGCTCTTCGCTGGA 785951 Query 52592 TCGAAAACGACAAAG---CCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAG 52648 || |||||| | |||| |||||| | ||||| || || |||||| || || | Sbjct 785950 TCTC---CGACAAGGAGTCCACCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTCGAGG 785894 Query 52649 GTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATG 52707 | | || || || || |||||| | || || | |||| || | ||| | | ||| Sbjct 785893 GCATCTTCTTCTCTGGCGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTC-TGATG 785835 Query 52708 CCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTT 52767 |||||||| || ||| ||||||| | || ||||| ||||| || | ||||| |||||| Sbjct 785834 CCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGATTTT 785775 Query 52768 GCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCAT-ATGAAAAAATTCTAGA 52826 || || || | | | | | | | || || || || | | | | || ||| Sbjct 785774 GCCTGCCTGC--TGCACT-CTCACCTCAAC--AACCGTGCCAGCAAGGAGATTATCAAGA 785720 Query 52827 C-ATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTAT 52885 | || | | || |||||| |||||| || ||||| | || || ||| | || Sbjct 785719 CCATCATCACTGATGCCGTCACCATTGAGAAGGAGTTCCTCACAGAGGCTCTTCCTTGCG 785660 Query 52886 CATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGAC 52945 | || ||||||||||||| ||| ||||| ||||||| ||||||||||| ||| | | Sbjct 785659 CGCTGCTGGGCATGAACGCCACCCTGATGCAGCAGTACATTGAGTTTGTTGCTGACCGTC 785600 Query 52946 TGTTGATGCAGCTCGGTCAGCCGAAATA-CTATAATGCGCGTAACCCCTTTTCGTTTATG 53004 | | | ||||| || | ||| | ||| || | ||||||||| |||||| Sbjct 785599 TCCTCGTCGCTCTCGG-CAACGAAAAGATCTACAAGTCCACCAACCCCTTTGACTTTATG 785541 Query 53005 AACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 | ||||| || |||| ||||| || ||||| ||||||| ||||| ||||||||| Sbjct 785540 GAGAACATTTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTAC 785484 >seq1 Length=6660791 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| ||||| | ||||| || || |||||||| || |||||| Sbjct 5934749 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTC 5934690 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| ||||||||| |||| || || ||||| || ||||| Sbjct 5934689 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGG 5934630 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || || || |||||| || | | || | ||||| | || ||| || Sbjct 5934629 ATACCCTCCTTATCCTGGATTTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACT 5934570 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||||||||| | || || ||||| || |||||| Sbjct 5934569 TCCAGCGTAATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 5934522 >seq78 Length=2267730 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||||||| |||| || |||||||| || || Sbjct 1891586 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 1891645 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| || ||||| || || || ||||| || ||||| ||| || || Sbjct 1891646 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1891705 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | ||||||||||| ||| | ||||| || || | || Sbjct 1891706 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTC 1891765 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 1891766 TTGACGAAAATCTGCAT 1891782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063200096800