Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29]
129 sequences; 34,681,960 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq67 136 4e-27
seq1 114 1e-20
seq78 95.1 1e-14
>seq67
Length=3269952
Score = 136 bits (150), Expect = 4e-27
Identities = 360/537 (67%), Gaps = 17/537 (3%)
Strand=Plus/Minus
Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591
|||||||| |||||| | || || | || ||||||| || ||||| | ||||
Sbjct 786010 TCAACGCTATTGACACCATCCCTTGCATCCGTAAAAAGGCCGACTGGGCTCTTCGCTGGA 785951
Query 52592 TCGAAAACGACAAAG---CCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAG 52648
|| |||||| | |||| |||||| | ||||| || || |||||| || || |
Sbjct 785950 TCTC---CGACAAGGAGTCCACCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTCGAGG 785894
Query 52649 GTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATG 52707
| | || || || || |||||| | || || | |||| || | ||| | | |||
Sbjct 785893 GCATCTTCTTCTCTGGCGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTC-TGATG 785835
Query 52708 CCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTT 52767
|||||||| || ||| ||||||| | || ||||| ||||| || | ||||| ||||||
Sbjct 785834 CCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGATTTT 785775
Query 52768 GCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCAT-ATGAAAAAATTCTAGA 52826
|| || || | | | | | | | || || || || | | | | || |||
Sbjct 785774 GCCTGCCTGC--TGCACT-CTCACCTCAAC--AACCGTGCCAGCAAGGAGATTATCAAGA 785720
Query 52827 C-ATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTAT 52885
| || | | || |||||| |||||| || ||||| | || || ||| | ||
Sbjct 785719 CCATCATCACTGATGCCGTCACCATTGAGAAGGAGTTCCTCACAGAGGCTCTTCCTTGCG 785660
Query 52886 CATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGAC 52945
| || ||||||||||||| ||| ||||| ||||||| ||||||||||| ||| | |
Sbjct 785659 CGCTGCTGGGCATGAACGCCACCCTGATGCAGCAGTACATTGAGTTTGTTGCTGACCGTC 785600
Query 52946 TGTTGATGCAGCTCGGTCAGCCGAAATA-CTATAATGCGCGTAACCCCTTTTCGTTTATG 53004
| | | ||||| || | ||| | ||| || | ||||||||| ||||||
Sbjct 785599 TCCTCGTCGCTCTCGG-CAACGAAAAGATCTACAAGTCCACCAACCCCTTTGACTTTATG 785541
Query 53005 AACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
| ||||| || |||| ||||| || ||||| ||||||| ||||| |||||||||
Sbjct 785540 GAGAACATTTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTAC 785484
>seq1
Length=6660791
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| ||| ||||| | ||||| || || |||||||| || ||||||
Sbjct 5934749 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTC 5934690
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| |||||||| ||||||||| |||| || || ||||| || |||||
Sbjct 5934689 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGG 5934630
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || || || |||||| || | | || | ||||| | || ||| ||
Sbjct 5934629 ATACCCTCCTTATCCTGGATTTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACT 5934570
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||||||||| | || || ||||| || ||||||
Sbjct 5934569 TCCAGCGTAATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 5934522
>seq78
Length=2267730
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || ||||||| |||| || |||||||| || ||
Sbjct 1891586 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 1891645
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| ||||||| || ||||| || || || ||||| || ||||| ||| || ||
Sbjct 1891646 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1891705
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||||| | ||||||||||| ||| | ||||| || || | ||
Sbjct 1891706 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTC 1891765
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 1891766 TTGACGAAAATCTGCAT 1891782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063200096800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |