Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq67 93.3 4e-14 >seq1 Length=6660791 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||||| ||| || || | |||||||| || || |||||||| |||||| Sbjct 5934749 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTC 5934690 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| || ||||||||| |||| || || ||||| || ||||| Sbjct 5934689 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGG 5934630 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || || || ||||| || | | || | |||||||| || || ||| Sbjct 5934629 ATACCCTCCTTATCCTGGATTTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACT 5934570 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||||||||| | ||| || ||||| || |||||| Sbjct 5934569 TCCAGCGTAATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 5934522 >seq67 Length=3269952 Score = 93.3 bits (102), Expect = 4e-14 Identities = 245/362 (68%), Gaps = 13/362 (4%) Strand=Plus/Minus Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559 ||||||||||| || ||| ||||||| | || ||||| ||||| || | ||||| || Sbjct 785837 ATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGAT 785778 Query 50560 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCAT--ACGAAACAATTT 50617 ||||| || || || || | | | | | || || | || | || | || Sbjct 785777 TTTGCCTGCCTG--CTGCACT-CTCACCTCAAC--AACCGTGCCAGCAAGGAGATTATCA 785723 Query 50618 TGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCG 50677 | ||| ||| || |||||| ||| || || ||||| |||| || ||| | || Sbjct 785722 AGACCATCATCACTGATGCCGTCACCATTGAGAAGGAGTTCCTCACAGAGGCTCTTCCTT 785663 Query 50678 TGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACA 50737 || || ||||||||||||| | ||||| ||||||||||||||||||| ||| Sbjct 785662 GCGCGCTGCTGGGCATGAACGCCACCCTGATGCAGCAGTACATTGAGTTTGTTGCTGACC 785603 Query 50738 G-ATTGTTGTTGCAGCTGGGACAACCGAAATA-CTATAA-TGCACGTAACCCCTTTCCGT 50794 | | | || || || || |||| ||| | ||| || | ||| ||||||||| | Sbjct 785602 GTCTCCTCGTCGC-TCTCGG-CAACGAAAAGATCTACAAGTCCAC-CAACCCCTTTGACT 785546 Query 50795 TTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAAT 50854 ||||| | ||||| || | | ||||| || ||||| ||||| | ||||| ||||| | Sbjct 785545 TTATGGAGAACATTTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGT 785486 Query 50855 AC 50856 || Sbjct 785485 AC 785484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013582439280