Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 120 7e-22 seq78 95.1 3e-14 >seq1 Length=6660791 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| |||||||| || ||||| ||||| | |||||| || || || || ||| Sbjct 5934719 GTAGATTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCA 5934660 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || |||||||| || || || |||||||| || || | || Sbjct 5934659 GCAAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGGATTTTGGACTTG 5934600 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | ||| || || || || ||||||||||| || || ||||| Sbjct 5934599 ACGTTGTCAATCGTGTC-CGAGGACTCGACTTCCAGCGTAATAGTCTTGCCGGTGAGTGT 5934541 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 5934540 CTTGACGAAAATCTGCAT 5934523 Score = 105 bits (116), Expect = 2e-17 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || |||||||| | ||| | ||| ||||| || || || |||||||| Sbjct 5934941 TCCTTCTGGATGTTATAGTCGCTCAAAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAG 5934882 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | ||| || |||||||| || || || |||||||||||||| | || || || Sbjct 5934881 ATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTG 5934822 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | ||| || || || | ||||| ||||| |||||||| || || || Sbjct 5934821 TCAATCGTGTC-CGAGGACTCGACTTCCAAGGTAATCGTCTTTCCAGTAAGAGTCTTGAC 5934763 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 5934762 GAAAATCTGCAT 5934751 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || || | || || || || || || ||| Sbjct 5934263 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 5934204 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| || || || || || || || || ||||||||||| | || Sbjct 5934203 GCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 5934144 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || | ||||||| || || ||||| || || || ||||| || || Sbjct 5934143 ACATTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 5934091 >seq78 Length=2267730 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || | || || || || || || || Sbjct 1891586 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 1891645 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || || || || ||||| ||||| | || Sbjct 1891646 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1891705 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| || || ||||| || || ||||||||||| || || || Sbjct 1891706 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTC 1891765 Query 104543 TTTACAAATATCTGCATTTTGTGTACA 104569 || || || |||||||| ||| |||| Sbjct 1891766 TTGACGAAAATCTGCATCTTGCCTACA 1891792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396496954332