Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq78 84.2 2e-11 >seq1 Length=6660791 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 |||||| ||| |||||| || ||||||||||| | || || || ||||||| |||| Sbjct 5934498 ATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCG-AAAGGGTGCGACCGTCCTCAAGCT 5934440 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || |||| | |||||||| || || | || ||||||||| || | Sbjct 5934439 GCTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCT 5934380 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 || ||||| | | |||||||||| ||||||| ||||| || || || || || | Sbjct 5934379 TCGACTTGACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAG 5934320 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || |||||||| Sbjct 5934319 TGAGGGTCTTGACGAAGATCTGCAT 5934295 >seq78 Length=2267730 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||| |||||| || |||||||| || || | || || | ||||| ||||| Sbjct 1891580 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCATCCTCGAGCTG 1891638 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | | || | |||||||| ||| || | | ||||||||| || || Sbjct 1891639 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 1891698 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || ||||| |||| ||||||| ||| | || || || ||||| Sbjct 1891699 GGACTTGACGTTGTCG--ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCC 1891756 Query 48701 GTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 ||||| || || || |||||||||||| || || Sbjct 1891757 GTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 1891789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250537714129