Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 125 2e-23 seq78 96.9 8e-15 seq67 91.5 3e-13 >seq1 Length=6660791 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| ||| || || ||||| || || || | Sbjct 5934521 CCACCACGGAGGCGGAGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 5934462 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| || || ||||| || | ||| Sbjct 5934461 AGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGG 5934402 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | |||| || || || Sbjct 5934401 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCGGAAGACTCCACC 5934342 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 5934341 TCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5934295 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || || |||| ||||| || || ||||| ||||||||| Sbjct 5934977 CCACCGCGCAGACGGAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTATAGTCGCTC 5934918 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | || || || || ||||||| |||||| || | ||| Sbjct 5934917 AAAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 5934858 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || || | || ||||| || || | || || || ||| Sbjct 5934857 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACT 5934798 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || |||||||| || || |||||||||||||| |||||||| Sbjct 5934797 TCCAAGGTAATCGTCTTTCCAGTAAGAGTCTTGACGAAAATCTGCAT 5934751 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || |||||| || ||||| ||||| || | || || || || || Sbjct 5934714 TTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAA 5934655 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || ||||| || | ||||| || || |||||||||||||| | || ||||| Sbjct 5934654 GATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGGATTTTGGACTTGACGTT 5934595 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || ||||| ||||| || ||||| ||||| || |||||||| Sbjct 5934594 GTCAATCGTGTCCGAGGACTCGACTTCCAGCGTAATAGTCTTGCCGGTGAGTGTCTTGAC 5934535 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 5934534 GAAAATCTGCAT 5934523 >seq78 Length=2267730 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| || ||||| || || || | || || || || ||| Sbjct 1891592 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 1891651 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || ||||| || || || |||||||| || | || ||||| Sbjct 1891652 ATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1891711 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || ||||| ||||| || || || ||||||||| Sbjct 1891712 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACG 1891771 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1891772 AAAATCTGCAT 1891782 >seq67 Length=3269952 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214 || ||||| ||| || ||| | || || || || || || ||||| ||| || || Sbjct 785651 GGCATGAACGCCACCCTGATGCAGCAGTACATTGAGTTTGTTGCTGACCGTCTCCTCGTC 785592 Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274 || ||||| | || || | ||||| || | || ||||| | ||||||||| ||| Sbjct 785591 GCTCTCGGCAACGAAAAGATCTACAAGTCCACCAACCCCTTTGACTTTATGGAGAACATT 785532 Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || |||| || ||||| ||||||||||| ||||||||| |||| || || Sbjct 785531 TCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTACCA 785482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652450252462