Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq67 140 3e-28 seq1 129 6e-25 seq78 111 1e-19 >seq67 Length=3269952 Score = 140 bits (154), Expect = 3e-28 Identities = 290/425 (68%), Gaps = 15/425 (4%) Strand=Plus/Minus Query 47160 GTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGA 47219 ||||||||| |||||||||| ||| ||||| | || || | | || | || Sbjct 785900 GTCGAGGGCATCTTCTTCTCTGGCGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGT 785841 Query 47220 GTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACC 47279 | ||||||||||| || ||| ||||||||| |||||| | ||||| ||||| |||||| Sbjct 785840 CTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACC 785781 Query 47280 AACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGA-CGTGCCCACCGT 47338 | |||||||| || || || | || || | ||| || | | | | | Sbjct 785780 GATTTTGCCTGCCTG--CTGCA-CTCTCACCTCAA-CAACCGTGCCAGCAAGGAGATTAT 785725 Query 47339 CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCC 47398 || ||| | | || |||||| ||||||||| |||||| || | |||||||| || Sbjct 785724 CAAGACCATCATCACTGATGCCGTCACCATTGAGAAGGAGTTCCTCACAGAGGCTCTTCC 785665 Query 47399 CGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGA 47458 | | |||| |||||||| ||||| ||||||| || ||||| || || Sbjct 785664 TTGCGCGCTGCTGGGCATGAACGCCACCCTGATGCAGCAGTACATTGAGTTTGTTGCTGA 785605 Query 47459 CCGCCTGCTCGT-----TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTC 47513 ||| || ||||| || || || | | ||||| ||| | || || || || Sbjct 785604 CCGTCTCCTCGTCGCTCTCGGC-AACGAA----AAGATCTACAAGTCCACCAACCCCTTT 785550 Query 47514 GAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGC 47573 || |||||| | |||||||| |||| |||||||||||||| ||||||||||| |||||| Sbjct 785549 GACTTTATGGAGAACATTTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGC 785490 Query 47574 GAATA 47578 || || Sbjct 785489 GAGTA 785485 >seq1 Length=6660791 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||||| || || ||||| ||||| |||| | Sbjct 5934749 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTC 5934690 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || ||||| |||| | |||||||| || ||||| Sbjct 5934689 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGG 5934630 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| |||||| ||||| ||||| | | ||||||| |||||| Sbjct 5934629 ATACCCTCCTTATCCTGGATTTTGGACTTGACGTTGT-CAATCGTGTCCGAGGACTCGAC 5934571 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || |||||||| || || || || ||||||||||| Sbjct 5934570 TTCCAGCGTAATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 5934523 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || || || |||| || |||||| ||| || ||||| || ||||| | Sbjct 5934942 CTCCTTCTGGATGTTATAGTCGCTCAAAGTGCGACCATCTTCCAGCTGCTTACCAGCAAA 5934883 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 |||||| |||||||| || ||||| ||||||||||| ||| || || ||||| ||| Sbjct 5934882 GATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTT 5934823 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 || | | ||||||| ||||||||| | ||| | ||| || || || ||||| || | Sbjct 5934822 GT-CAATCGTGTCCGAGGACTCGACTTCCAAGGTAATCGTCTTTCCAGTAAGAGTCTTGA 5934764 Query 127101 CAAAAATCTGCAT 127113 | ||||||||||| Sbjct 5934763 CGAAAATCTGCAT 5934751 Score = 100 bits (110), Expect = 3e-16 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| || ||||| ||| || ||||| || ||||| ||||| Sbjct 1522953 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 1522894 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||||||| ||| || ||||| | ||| Sbjct 1522893 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1522834 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||||| |||||| || | ||| | || ||||| ||||| || || || ||| Sbjct 1522833 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 1522774 Query 127106 ATCTGCA 127112 ||||| Sbjct 1522773 --CTGCA 1522769 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | |||||| || || ||||| || || Sbjct 5934491 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCG 5934432 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | |||||||| || ||||| || |||||||||||| ||| ||| |||| Sbjct 5934431 GCGAAAATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 5934372 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | | ||| || |||| ||| | || ||||| || || || Sbjct 5934371 ACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTC 5934312 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 5934311 TTGACGAAGATCTGCAT 5934295 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | || || ||| || ||||| || ||| Sbjct 5934263 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 5934204 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||| ||||| || ||||||||||||||| || || |||| Sbjct 5934203 GCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 5934144 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | | |||| ||| || | | |||||| |||| || | || |||||||| Sbjct 5934143 ACATTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 5934091 >seq78 Length=2267730 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| |||| || ||||| ||| || ||||| || || Sbjct 1891586 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 1891645 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 1891646 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1891705 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | ||| || || | ||| | || || || || || || Sbjct 1891706 ACGTTG-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGT 1891764 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 1891765 CTTGACGAAAATCTGCAT 1891782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500033254960