Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq78 86.0 6e-12 >seq1 Length=6660791 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| ||||| ||||| | || | ||| |||| || || || || | Sbjct 5934941 TCCTTCTGGATGTTATAGTCGCTCAAAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAG 5934882 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| || |||||||| || || ||||| || ||||| ||||| || |||| || | Sbjct 5934881 ATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 5934823 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||||| || ||||||||||| | |||| ||| || || || ||||| || || Sbjct 5934822 GTCAATCGTGTCCGAGGACTCGACTTCCAAGGTAATCGTCTTTCCAGTAAGAGTCTTGAC 5934763 Query 45329 AAAAATTTGCAT 45340 ||||| ||||| Sbjct 5934762 GAAAATCTGCAT 5934751 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || || ||||| ||||| || || ||| Sbjct 5934296 ATACCACCGCGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 5934237 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || || || ||| | |||| || |||||||| || Sbjct 5934236 GAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGG 5934177 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || || || ||||| || |||| || | ||| |||||||||||| Sbjct 5934176 GGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCGGAAGACTCG 5934117 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316 || |||||||| | || |||||||| Sbjct 5934116 ACCTCGAGAGTGATGGTCTTGCCGGT 5934091 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || |||||||| || || || || ||||| | || | || || | || Sbjct 5934725 TGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGC 5934666 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | || |||||||| || || || || || ||||| || ||||| Sbjct 5934665 TTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGGATTTTG 5934606 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | ||||| || ||||||||||| || |||| || |||||||| Sbjct 5934605 GACTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGCGTAATAGTCTTGCCGGT 5934547 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| ||||| Sbjct 5934546 GAGTGTCTTGACGAAAATCTGCAT 5934523 >seq78 Length=2267730 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| ||||| || || ||||| | ||| ||| || Sbjct 1891574 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 1891633 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || || | |||| || ||||||||||| || ||||| || || || || Sbjct 1891634 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1891693 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||||||||||||||| || || || || | || || Sbjct 1891694 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTT 1891752 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || || || ||||| |||||| Sbjct 1891753 ACCCGTGAGGGTCTTGACGAAAATCTGCATC 1891783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002471144840