Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 seq78 86.0 4e-12 >seq1 Length=6660791 Score = 105 bits (116), Expect = 4e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCAT 34830 ||||| ||||| ||||| || ||||| ||||||||||| | || | | || |||| | Sbjct 5934960 AACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTATAGTCGCTCAAAG-TGCGACCATCTT 5934902 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 ||||||| || || ||||| || | || |||||||| | || | |||||||| || Sbjct 5934901 CCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCT 5934842 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 |||||| |||||| | |||| || || ||| || || | ||| || || | Sbjct 5934841 GAATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAAGGTAATCGTCT 5934782 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || |||||||| || || ||||||||| Sbjct 5934781 TTCCAGTAAGAGTCTTGACGAAAATCTGCATA 5934750 Score = 95.1 bits (104), Expect = 8e-15 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || ||||||||| | || | || || ||||| || ||||| || Sbjct 5934485 TCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAA 5934426 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| ||||| || Sbjct 5934425 ATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 5934368 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | ||| || |||| ||| || || || || ||||| ||||| Sbjct 5934367 --TGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTT 5934310 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 5934309 GACGAAGATCTGCATA 5934294 >seq78 Length=2267730 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| ||| | || |||| || Sbjct 1891574 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 1891633 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || |||||||| | || | ||||||||||| Sbjct 1891634 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1891693 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | ||| || || || Sbjct 1891694 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTA 1891753 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||||||| ||||| || || |||||||| || Sbjct 1891754 CCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1891785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633089615112