Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 >seq1 Length=6660791 Score = 123 bits (136), Expect = 2e-23 Identities = 278/407 (68%), Gaps = 22/407 (5%) Strand=Plus/Plus Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044 |||||||||||| | ||| |||||||||| || || |||||||| ||| ||| || Sbjct 1258109 CACGTAAAACTGCGCAAACA---TGTGGCACGGCGGCAGCGCCATGAGCGCCAGGTCCTT 1258165 Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30101 ||||||||| || | | ||||||||||| ||| | || |||| | | || | Sbjct 1258166 GGGGTTCCACGCCGAGAGGATGATGCGCCGGTCGTGCGGCGTGTTGCGCAGCTTGTCCAC 1258225 Query 30102 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 30160 ||||||| || ||||| || || ||| || | |||||| | | ||| || Sbjct 1258226 CACGGCG----GCGAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCGCGGCGTCGACGT 1258281 Query 30161 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30220 | | || || || |||| |||||||||||||||||| || |||||||| || | | | Sbjct 1258282 AGGCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGACGGCGC 1258341 Query 30221 TGTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 ||| | |||||| | ||| | || || | || |||||| ||||||||||||| Sbjct 1258342 GGTG-GCCCAGCCCCGCGCCGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTG 1258400 Query 30280 ACCCCCTTCTCGGAGAGC-TCTTTG--GAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30336 || ||| || ||| | | ||| | || ||| | |||||||||||||||| Sbjct 1258401 ACGCCCGCGGCGCTCAGCGGCAGCGACGAGGTGCTG--CCCGC-GACGAACCACAGCAGC 1258457 Query 30337 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAgggg 30383 ||| | || ||||| | || || | ||| ||||| ||||| || Sbjct 1258458 TCCGCGACCACGGCGCGCAGGAACACGCGCTTCGTCGTCAGGAGAGG 1258504 Score = 95.1 bits (104), Expect = 1e-14 Identities = 212/318 (67%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 29655 TCAGACTGCAATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATC 29714 |||||||| ||| ||||| || | || |||||||| |||| | | || || Sbjct 1257725 TCAGACTGACATCTTCATCGCAATCGTCTTGTGCGGGTCGTAGCCCTTGACGACAAAGTC 1257784 Query 29715 CTCTGCCTTAAAGTCGTCCAGGTTCTCCACCCT---CCTGTTTATCCTCAGTGTGGGAAA 29771 ||| ||| | || | || | | || | |||| || | ||| || || ||||| Sbjct 1257785 CTCGGCCGTCCAGCCATCAATGCTCCCGCCCCTGTCCCGGCCAATCTCGAGCGTCGGAAA 1257844 Query 29772 GGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTG 29831 | || ||||| | ||||||||| || ||||| || || || ||| ||| ||||| Sbjct 1257845 CGCCCTCGGCTCGCGCTCGAGCTGCACCTGCAGCGCCTCGACATGGTCCTTGTACACGTG 1257904 Query 29832 AGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCAT 29891 ||||| |||| | || | | || || | || || |||||| || | ||| Sbjct 1257905 CGCGTCGCCCATGACCTGCGTCAGCGTGCCGGGCACCAGGTCGCAGACGTGGGCGAGCAT 1257964 Query 29892 GTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGA 29951 | ||| || || | ||||||||| ||||| || || || ||||| |||||||| | || Sbjct 1257965 ATGCGTCAGCAGCGCGTAGCTGGCAATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGA 1258024 Query 29952 CCTCTGGTAGAGCTGACA 29969 | |||||||||||| || Sbjct 1258025 GCGCTGGTAGAGCTGGCA 1258042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616957576517