Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-22 seq78 86.0 5e-12 >seq1 Length=6660791 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| ||||| || | ||||| || || ||||| |||||||||||| Sbjct 5934749 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTC 5934690 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| |||||||| ||||| || | ||||| ||||| || || || || Sbjct 5934689 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGG 5934630 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| ||| ||| || | | | || | ||||| | || || ||| Sbjct 5934629 ATACCCTCCTTATCCTGGATTTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACT 5934570 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||| ||||| || || || || || || || |||||| Sbjct 5934569 TCCAGCGTAATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 5934522 >seq78 Length=2267730 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/236 (68%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 27015 TTATTGCCTCCGC---GCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 || ||||| |||| ||| || | |||| || | || || || || || || ||| Sbjct 1891547 TTCTTGCCACCGCCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTG 1891606 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 |||||||||| | |||| | || |||||||| || ||||| | || || ||||| || Sbjct 1891607 TAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGG 1891666 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 ||||| || | ||||| || || ||||||| || | | | || | ||||| | Sbjct 1891667 TCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAA 1891726 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || |||| || ||||| || || || || || || ||||| Sbjct 1891727 GACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 1891782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933731923448