Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=6660791 Score = 127 bits (140), Expect = 2e-24 Identities = 279/408 (68%), Gaps = 24/408 (6%) Strand=Plus/Plus Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117 |||||||||||| | |||| ||||||||| || || |||||||| ||| ||| || Sbjct 1258109 CACGTAAAACTGCGCAAACAT---GTGGCACGGCGGCAGCGCCATGAGCGCCAGGTCCTT 1258165 Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174 ||||||||| || | | ||||||||||| ||| | || |||| | | || | Sbjct 1258166 GGGGTTCCACGCCGAGAGGATGATGCGCCGGTCGTGCGGCGTGTTGCGCAGCTTGTCCAC 1258225 Query 30175 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 30233 ||||||| || ||||| || || ||| || | |||||| | | ||| || Sbjct 1258226 CACGGCG----GCGAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCGCGGCGTCGACGT 1258281 Query 30234 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30293 | | || || || |||| |||||||||||||||||| || |||||||| || | | | Sbjct 1258282 AGGCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGACGGCGC 1258341 Query 30294 TGTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 ||| | |||||| | ||| | || || | || |||||| ||||||||||||| Sbjct 1258342 GGTG-GCCCAGCCCCGCGCCGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTG 1258400 Query 30353 ACCCCC----TTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAG 30408 || ||| ||||| | || ||| | || ||| | ||||||||||||||| Sbjct 1258401 ACGCCCGCGGCGCTCAGCG-GCAGCGACGAGGTGCTG--CCCGC-GACGAACCACAGCAG 1258456 Query 30409 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||| | || ||||| | || || | ||| ||||| ||||| || Sbjct 1258457 CTCCGCGACCACGGCGCGCAGGAACACGCGCTTCGTCGTCAGGAGAGG 1258504 Score = 98.7 bits (108), Expect = 8e-16 Identities = 213/318 (67%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 29728 TCAGACTGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATC 29787 |||||||| |||| ||||| || | || |||||||| |||| | | || || Sbjct 1257725 TCAGACTGACATCTTCATCGCAATCGTCTTGTGCGGGTCGTAGCCCTTGACGACAAAGTC 1257784 Query 29788 CTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCT---CCTGTTTATCCTCAGTGTGGGAAA 29844 ||| ||| | || | || | |||| | |||| || | ||| || || ||||| Sbjct 1257785 CTCGGCCGTCCAGCCATCAATGCTCCCGCCCCTGTCCCGGCCAATCTCGAGCGTCGGAAA 1257844 Query 29845 GGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTG 29904 | || ||||| | ||||||||| || ||||| || || | ||| ||| ||||| Sbjct 1257845 CGCCCTCGGCTCGCGCTCGAGCTGCACCTGCAGCGCCTCGACATGGTCCTTGTACACGTG 1257904 Query 29905 AGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCAT 29964 ||||| |||| | || | | || || | || || |||||| || | ||| Sbjct 1257905 CGCGTCGCCCATGACCTGCGTCAGCGTGCCGGGCACCAGGTCGCAGACGTGGGCGAGCAT 1257964 Query 29965 GTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGA 30024 | ||| || || | ||||||||| ||||| || || || ||||| |||||||| | || Sbjct 1257965 ATGCGTCAGCAGCGCGTAGCTGGCAATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGA 1258024 Query 30025 CCTCTGGTAGAGCTGACA 30042 | |||||||||||| || Sbjct 1258025 GCGCTGGTAGAGCTGGCA 1258042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309761203868