Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 seq78 82.4 5e-11 >seq1 Length=6660791 Score = 107 bits (118), Expect = 1e-18 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT- 34534 || ||| || | ||||| | |||| || || ||||||||||| || |||||||| | Sbjct 5934981 GTTGCCACCGCGCAGACGGAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTATAGTC 5934922 Query 34535 -CTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCC 34593 || |||||| || | ||||| || || ||||| ||||| || |||||||| ||||| Sbjct 5934921 GCTCAAAGTG--CGACCATCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCA 5934864 Query 34594 GGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT 34652 || || | |||||||| || ||| || | || ||| | ||| ||||| | Sbjct 5934863 GGAGGGATGCCCTCCTTATC-CTGAATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGA 5934805 Query 34653 CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||||| ||| ||||| || || || | || || || ||||||||||| Sbjct 5934804 CTCGACTTCCAAGGTAATCGTCTTTCCAGTAAGAGTCTTGACGAAAATCTGCAT 5934751 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || ||||| ||||| |||||||| || || || || || Sbjct 5934740 AGACGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGA 5934681 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| ||||| || | ||||| ||||| || || | |||||| Sbjct 5934680 CCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCC 5934621 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| ||| | || ||| | ||| ||||| | ||| ||||||| || Sbjct 5934620 TTATCCTGGAT-TTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGCGT 5934562 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || || || ||||||||||| Sbjct 5934561 AATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 5934523 Score = 86.0 bits (94), Expect = 4e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| |||||| |||||| || ||||| ||||| ||||| || || |||| ||||| || Sbjct 5934498 ATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTG 5934439 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || | ||||| ||||| || || | ||||||||||| |||||| Sbjct 5934438 CTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 5934379 >seq78 Length=2267730 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || || | |||| ||||| ||| |||||| || ||||| || || Sbjct 1891556 CCGCCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1891615 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || || || || |||||||| || | ||||| |||||||| || Sbjct 1891616 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1891675 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || ||||| |||||| Sbjct 1891676 ATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1891734 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || | ||| || || ||||| || | || || || ||||||||||| ||| Sbjct 1891735 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 1891786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729105186057