Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 185 2e-41 seq78 167 5e-36 >seq1 Length=6660791 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || |||||||||||||| || |||||||| ||||||| |||||| | || || Sbjct 5934506 AGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCC 5934447 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || ||||| || ||||||||||| | || ||||||||| Sbjct 5934446 TCAAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 5934387 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| || || || |||||||| ||||| ||| Sbjct 5934386 TGGATCTTCGACTTGACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTC 5934327 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 5934326 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5934295 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| ||||| || |||||||| || |||||||| || || | ||||| Sbjct 5934287 CGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 5934228 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || ||||||||||| ||||| || ||||| || ||||| || |||| || Sbjct 5934227 CGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCCC 5934168 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| || || || |||||||| || || || ||||||||| Sbjct 5934167 TCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGA 5934108 Query 211074 GTGATCGTCTTTCCCGTGA 211092 ||||| ||||| || |||| Sbjct 5934107 GTGATGGTCTTGCCGGTGA 5934089 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| || ||||||||||| || ||||| Sbjct 1522953 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 1522894 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| || | || ||||||||||||||||| || || || ||| Sbjct 1522893 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1522834 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 1522833 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1522775 Score = 138 bits (152), Expect = 3e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || |||||||| ||| ||| || ||||||||||| || | ||| | | | ||||| Sbjct 5934962 AGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTATAGTCGCTCAAAG-TGCGACCATC 5934904 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||||||||||| || || ||||| | || || ||||||||||| | || ||||| || Sbjct 5934903 TTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 5934844 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| || ||||| || || ||||| ||| || || || | || ||||| Sbjct 5934843 CTGAATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAAGGTAATCGT 5934784 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || |||||||| || || | |||||| Sbjct 5934783 CTTTCCAGTAAGAGTCTTGACGAAAATCTGCAT 5934751 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| || || || || ||||| || || || || | || || Sbjct 5934734 AGAACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCC 5934675 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| ||||| || ||||||||||| | || ||||| ||| Sbjct 5934674 TCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 5934615 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||| || || ||||| ||| || || || || || || ||| Sbjct 5934614 TGGATTTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGCGTAATAGTC 5934555 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 5934554 TTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 5934523 >seq78 Length=2267730 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || ||||| | ||||| Sbjct 1891571 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 1891630 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| || || | || ||||||||| Sbjct 1891631 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1891690 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||| ||| Sbjct 1891691 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 1891750 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 1891751 TTACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1891785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150084139085