Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29]
129 sequences; 34,681,960 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
seq78 89.7 4e-13
>seq1
Length=6660791
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| || ||| ||| || || || || ||||| | ||| || || |||| ||||||||
Sbjct 5934498 ATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTG 5934439
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || ||||||||||| | || | | ||| |||||| ||| ||
Sbjct 5934438 CTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 5934379
Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
| |||| | | | |||||| |||||||| || | |||||| | || || ||
Sbjct 5934378 CGACTTGACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 5934319
Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || ||||| |||||
Sbjct 5934318 GAGGGTCTTGACGAAGATCTGCAT 5934295
>seq78
Length=2267730
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| || || || || || ||| || || || | || ||
Sbjct 1891574 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 1891633
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| ||||| || || ||||||||||| | ||| | || ||| |||||| |
Sbjct 1891634 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1891693
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | || ||| |||||||| || | |||||| | ||
Sbjct 1891694 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTT 1891752
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
||||| || || || || || || ||||||||
Sbjct 1891753 ACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1891785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544924673777
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |