Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 seq78 89.7 4e-13 >seq1 Length=6660791 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| ||| || || || || ||||| | ||| || || |||| |||||||| Sbjct 5934498 ATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCAAGCTG 5934439 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || ||||||||||| | || | | ||| |||||| ||| || Sbjct 5934438 CTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 5934379 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 | |||| | | | |||||| |||||||| || | |||||| | || || || Sbjct 5934378 CGACTTGACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 5934319 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 5934318 GAGGGTCTTGACGAAGATCTGCAT 5934295 >seq78 Length=2267730 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || ||| ||| || || || || || ||| || || || | || || Sbjct 1891574 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 1891633 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || || ||||||||||| | ||| | || ||| |||||| | Sbjct 1891634 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1891693 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || ||| |||||||| || | |||||| | || Sbjct 1891694 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTT 1891752 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||||| || || || || || || |||||||| Sbjct 1891753 ACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1891785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544924673777