Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq78 95.1 8e-15 >seq1 Length=6660791 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || ||||| ||||| || | ||||| || ||| || Sbjct 5934751 ATGCAGATTTTCGTCAAGACTCTTACTGGAAAGACGATTACCTTGGAAGTCGAGTCCTCG 5934810 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| || || || || | || || || || Sbjct 5934811 GACACGATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 5934870 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||| || || || |||||||| | |||||||| |||| || ||| Sbjct 5934871 CAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTTTGAGCGACTATAAC 5934930 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 5934931 ATCCAGAAGGAG 5934942 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || || || || || || ||||| || ||| || Sbjct 5934523 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATTACGCTGGAAGTCGAGTCCTCG 5934582 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||||| || || || ||| | || || || || Sbjct 5934583 GACACGATTGACAACGTCAAGTCCAAAATCCAGGATAAGGAGGGTATCCCTCCTGACCAG 5934642 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| || || || || || |||| |||||| | |||| |||||| Sbjct 5934643 CAGCGCCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACTCTGAGCGACTACAAC 5934702 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || || || | || || ||| Sbjct 5934703 ATTCAGAAGGAATCTACTCTGCACTTGGTT 5934732 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||| || || || | Sbjct 5934295 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCC 5934354 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || | | ||||| || ||| | || || || || Sbjct 5934355 GATACCATCGACAATGTCAAGTCGAAGA-TCCAGGACAAGGAGGGTATCCCTCCTGACCA 5934413 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTAC 23787 ||||| | || || |||||||| || || || |||| ||||| ||| || ||||| Sbjct 5934414 GCAGCGCCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCGG--ATTAC 5934471 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 5934472 AACATCCAGAAGGAGTCCAC 5934491 >seq78 Length=2267730 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| || || ||||| || || || || || Sbjct 1891785 AAGATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 1891726 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || || Sbjct 1891725 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 1891666 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || ||||||||||| || || || || | ||||| | |||| ||| Sbjct 1891665 CAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 1891606 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 1891605 AACATCCAGAAGGAGTCCAC 1891586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009068585532