Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paecilomyces_20hepiali_20[genbank_20GCA_5F001455915.2_202016-02-29] 129 sequences; 34,681,960 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq78 150 4e-31 seq1 147 5e-30 >seq78 Length=2267730 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| |||||||| || ||| Sbjct 1891779 CAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 1891720 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 1891719 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 1891660 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 1891659 CGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 1891600 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1891599 CAGAAGGAGTCCACCCTCCACCTGGT 1891574 >seq1 Length=6660791 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||||||||||||||| || || Sbjct 5934298 CAGATCTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGAT 5934357 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 5934358 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 5934417 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || ||||| || || || | || ||| | ||||| ||| || Sbjct 5934418 CGCCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCGGATTACAACATC 5934477 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 5934478 CAGAAGGAGTCCACTCTTCATCTCGT 5934503 Score = 131 bits (144), Expect = 4e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||| ||||| || ||| |||||||| Sbjct 1522774 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 1522833 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| || |||||||| || || Sbjct 1522834 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 1522893 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || |||||||| ||||| | || || |||| || ||| |||| || Sbjct 1522894 GATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 1522953 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || ||||| ||||| ||| | || || || ||| ||| Sbjct 5934754 CAGATTTTCGTCAAGACTCTTACTGGAAAGACGATTACCTTGGAAGTCGAGTCCTCGGAC 5934813 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||||||||| || || || |||||||| |||||||| Sbjct 5934814 ACGATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAGCAG 5934873 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| |||||||| | ||| | ||| |||||| || Sbjct 5934874 CGTTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTTTGAGCGACTATAACATC 5934933 Query 178104 CAAAAAGA 178111 || || || Sbjct 5934934 CAGAAGGA 5934941 Score = 116 bits (128), Expect = 9e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| |||||||| || || || |||||||| || ||||| Sbjct 5934089 TCACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGATACCATCGACAATGTCAAGT 5934148 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || || || || |||||||| || || || ||||| || | Sbjct 5934149 CCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGCA 5934208 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| ||||| | || || |||| || ||| |||| || || || || || | Sbjct 5934209 AGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCC 5934268 Query 178123 ATCTTGT 178129 | || || Sbjct 5934269 ACCTCGT 5934275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729210458026