Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq302 194 2e-44
seq537 116 4e-21
>seq302
Length=64523
Score = 194 bits (214), Expect = 2e-44
Identities = 581/894 (65%), Gaps = 2/894 (0%)
Strand=Plus/Minus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
|| ||||| || || | |||| |||| || || ||||| ||||| | || | |
Sbjct 56092 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 56033
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070
|| || || | | || || ||||||||||| |||||||| ||||||| || | |||
Sbjct 56032 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 55973
Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130
||||| | | | | ||| || || || || || ||||| | ||| | | |
Sbjct 55972 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 55913
Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190
||||| |||||| || || | ||| |||| | |||| || || ||||| ||||||
Sbjct 55912 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 55853
Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250
|| || | |||||| || |||||||| |||| | | ||| |||| ||| || || ||
Sbjct 55852 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 55793
Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310
| ||||| || || | || ||| ||| | |||| || ||| |||||
Sbjct 55792 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 55733
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370
|| || || || | || || |||| || || ||| | || ||||| ||||||||
Sbjct 55732 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 55673
Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430
|| || || ||| |||| | || || || || | ||| || | | ||| ||
Sbjct 55672 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 55613
Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490
|| || || | ||||||||| || || || || | |||| || | || || || |||
Sbjct 55612 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 55553
Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550
|| || || || | || | || || || | || |||||||| | |||||||
Sbjct 55552 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 55493
Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610
|| || | || | | |||| || ||| |||||||| || | |||| || ||
Sbjct 55492 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 55433
Query 54611 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCC 54670
|| || ||||| | ||| ||||| || ||||||| |||| ||||||||| | ||||
Sbjct 55432 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 55373
Query 54671 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 54730
|| | | | || | || ||| | ||| || || || | | | || ||
Sbjct 55372 GCATGTCTCATTACGATTTCATACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 55313
Query 54731 TTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTA-AATAGtttttttGTTTC 54789
|| |||||| |||| | | ||| | ||||| || | ||| | || || ||||
Sbjct 55312 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 55254
Query 54790 TTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||||| || || ||||| || || | ||| |||||||| || || || |||||
Sbjct 55253 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 55200
>seq537
Length=102077
Score = 116 bits (128), Expect = 4e-21
Identities = 296/448 (66%), Gaps = 2/448 (0%)
Strand=Plus/Minus
Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890
|||||| || || ||||| ||||| ||||| || || || || ||||| || ||
Sbjct 35287 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 35228
Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950
| || || || |||||||||||| |||| |||||| || |||| | | ||| ||
Sbjct 35227 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 35168
Query 23951 CAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATT 24010
|| || | | || ||| || |||||||| || ||| ||| | | ||
Sbjct 35167 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 35108
Query 24011 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 24070
|||||| | |||| ||| ||||| | || || || || || || || | ||| ||
Sbjct 35107 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 35048
Query 24071 GTCTGTTATAATAGATCTTA-CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 24129
||||| || || ||| | | | ||| || || | | | || || |
Sbjct 35047 TTCTGTGATGATTT-TCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGA 34989
Query 24130 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 24189
| || ||||| || ||||| |||||| || | | || | || |||||||| |
Sbjct 34988 GAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGG 34929
Query 24190 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 24249
| || || ||||| ||||||||||| || ||||| || || |||||||| |||||| |
Sbjct 34928 TAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGA 34869
Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGC 24277
|||| || ||||| || || ||||||||
Sbjct 34868 AGAAGATACCTTCGACAGCAGCAAAGGC 34841
Score = 104 bits (114), Expect = 3e-17
Identities = 199/293 (68%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 24396 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 24455
|| || | ||| ||||| || | ||| || |||| || || |||||||| ||
Sbjct 34664 TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATG 34605
Query 24456 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCT 24515
|| || || |||||||| |||| ||||| | | ||| |||||| | || || ||
Sbjct 34604 ATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCG 34545
Query 24516 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 24575
| | || ||||| || ||||| || || || || || ||||| || ||| ||
Sbjct 34544 ACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATG 34485
Query 24576 AAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCC 24632
|| ||| ||||| | | | |||| ||| |||| | |||||| || | |||
Sbjct 34484 AAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCA 34425
Query 24633 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685
|||||||| | |||||||| ||||||||||| || || ||||| | ||||||
Sbjct 34424 ACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 34372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593711447360640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |