Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq725 113 7e-20 >seq725 Length=19491 Score = 113 bits (124), Expect = 7e-20 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| || | || || || || || || || || || | || | || || Sbjct 8397 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 8456 Query 124597 ATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 | ||||| ||| ||| ||||| || |||||||||||||||||||| || || || ||| Sbjct 8457 A-GATACGATTGACAATGTTAAATCA-AAAATTCAAGATAAAGAAGGCATCCCCCCCGAT 8514 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || || | |||||||| || ||||||||| | |||||| |||| || | |||||| Sbjct 8515 CAGCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTAT 8574 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || || ||| | ||| | || | ||| | || ||||| || Sbjct 8575 AATATCCAAAAGGAGTCCACTCTTCATCTCGTCCTCCGTCTCCGTGGTGGCAT 8627 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | || || || || ||||||||||| || | || |||| ||| Sbjct 8626 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGC-TC 8684 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | ||| ||||| |||||||| |||||||| ||||| ||||| Sbjct 8685 CGATACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATCA 8744 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| || ||||| | |||||| |||| || | || || || Sbjct 8745 GCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAA 8804 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||| || || || ||| | ||| |||| | | || || ||||| Sbjct 8805 TATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGG 8852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755443081702400