Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1192 89.7 4e-13 seq725 82.4 6e-11 >seq1192 Length=144406 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||||||||| || |||| |||| || || ||||| |||||||| Sbjct 8775 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAA 8834 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 |||| || || ||||||||||| | ||||||||||| Sbjct 8835 GATCAGACGTTGCTGGTCGGGAGGGATTCCCTCCTTGTC 8873 >seq725 Length=19491 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||||||||| || || || |||| |||| ||| Sbjct 8071 ACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCC 8012 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| |||| || || ||||| ||||| | || ||||||||| | Sbjct 8011 AACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGA 7952 Query 45248 ATTTT 45252 ||||| Sbjct 7951 ATTTT 7947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395068613108728