Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq537 111 3e-19 seq302 100 6e-16 >seq537 Length=102077 Score = 111 bits (122), Expect = 3e-19 Identities = 286/425 (67%), Gaps = 13/425 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || ||||| |||||||| ||||| | || || || || |||||| Sbjct 34838 GTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTTTGCGTCAATCTTCTGG 34897 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | || || |||| || || |||| ||||||||| | || ||| | || Sbjct 34898 CTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATGAGCTTATCTCTCGTGAT 34957 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || ||| | || ||||| || ||| | || || | | | ||||| Sbjct 34958 GAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTCTCA--CCTGCGCCACCGCCCCA 35015 Query 102098 -TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156 | |||| | ||| |||| |||| ||||| ||| || || || || || || Sbjct 35016 GCCCAGAGGCTG--TTCAGAAAATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTCCT 35073 Query 102157 CACAGTTTCCCTGCC-TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 ||||| | | || || || | || | ||||||||| |||| | ||| |||| |||| Sbjct 35074 CACAGATGCTCTCCCATGCGCACTT-CTCGGAATGAACGCCAAGCTCATGTGCCAATACA 35132 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGTT 102274 | || ||||| || ||| ||| | |||| |||| | || |||| ||| || | Sbjct 35133 TCGAGTTTGTTGCTGATCGACTCCTCGTTGCTCTGGGCAATAAGAAAG-TCTACAACTCT 35191 Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCT--CGAGAATAAGACCAACTTTTTTG 102332 |||||||| ||| ||||||||||| || || || | || ||||| ||||| |||| Sbjct 35192 ACCAACCCATTCGATTTCATGGACAACATCTCGCTGACTGGA--AAGACTAACTTCTTTG 35249 Query 102333 AAAAG 102337 | ||| Sbjct 35250 AGAAG 35254 >seq302 Length=64523 Score = 100 bits (110), Expect = 6e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94825 TTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAG 94884 || || || |||||||| ||||| ||||| || || | | | | |||||||||||| Sbjct 55696 TTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAG 55637 Query 94885 GAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAG 94944 | | || || | || ||| || || || || || || ||||| || || || Sbjct 55636 GCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTAC 55577 Query 94945 TGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCG 95004 | ||||||||| | |||||| |||||||| || | ||| |||||| || || Sbjct 55576 TTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCCGTGGATCCCA 55517 Query 95005 ACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039 | ||| |||||||||||||||| ||| |||||||| Sbjct 55516 ATAGCAACACGCATAATCATGTGCTGTGGGCGCTC 55482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989566655066440