Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq537 111 3e-19
seq302 100 6e-16
>seq537
Length=102077
Score = 111 bits (122), Expect = 3e-19
Identities = 286/425 (67%), Gaps = 13/425 (3%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||||||| || ||||| |||||||| ||||| | || || || || ||||||
Sbjct 34838 GTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTTTGCGTCAATCTTCTGG 34897
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | || || |||| || || |||| ||||||||| | || ||| | ||
Sbjct 34898 CTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATGAGCTTATCTCTCGTGAT 34957
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| ||| | || ||||| || ||| | || || | | | |||||
Sbjct 34958 GAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTCTCA--CCTGCGCCACCGCCCCA 35015
Query 102098 -TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
| |||| | ||| |||| |||| ||||| ||| || || || || || ||
Sbjct 35016 GCCCAGAGGCTG--TTCAGAAAATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTCCT 35073
Query 102157 CACAGTTTCCCTGCC-TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215
||||| | | || || || | || | ||||||||| |||| | ||| |||| ||||
Sbjct 35074 CACAGATGCTCTCCCATGCGCACTT-CTCGGAATGAACGCCAAGCTCATGTGCCAATACA 35132
Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGTT 102274
| || ||||| || ||| ||| | |||| |||| | || |||| ||| || |
Sbjct 35133 TCGAGTTTGTTGCTGATCGACTCCTCGTTGCTCTGGGCAATAAGAAAG-TCTACAACTCT 35191
Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCT--CGAGAATAAGACCAACTTTTTTG 102332
|||||||| ||| ||||||||||| || || || | || ||||| ||||| ||||
Sbjct 35192 ACCAACCCATTCGATTTCATGGACAACATCTCGCTGACTGGA--AAGACTAACTTCTTTG 35249
Query 102333 AAAAG 102337
| |||
Sbjct 35250 AGAAG 35254
>seq302
Length=64523
Score = 100 bits (110), Expect = 6e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94825 TTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAG 94884
|| || || |||||||| ||||| ||||| || || | | | | ||||||||||||
Sbjct 55696 TTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAG 55637
Query 94885 GAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAG 94944
| | || || | || ||| || || || || || || ||||| || || ||
Sbjct 55636 GCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTAC 55577
Query 94945 TGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCG 95004
| ||||||||| | |||||| |||||||| || | ||| |||||| || ||
Sbjct 55576 TTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCCGTGGATCCCA 55517
Query 95005 ACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||| |||||||||||||||| ||| ||||||||
Sbjct 55516 ATAGCAACACGCATAATCATGTGCTGTGGGCGCTC 55482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989566655066440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |