Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq302 208 1e-48
seq537 116 5e-21
>seq302
Length=64523
Score = 208 bits (230), Expect = 1e-48
Identities = 584/894 (65%), Gaps = 2/894 (0%)
Strand=Plus/Minus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|||||||| || || | |||| |||| | || ||||| ||||| | || | |
Sbjct 56092 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 56033
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || || | | || || ||||||||||| |||||||| ||||||| || | |||
Sbjct 56032 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 55973
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | | | ||| || || || || || ||||| | ||| | | |
Sbjct 55972 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 55913
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
||||| |||||| || || | ||| ||||| | |||| || || ||||| ||||||
Sbjct 55912 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 55853
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | |||||| || |||||||| |||| | | ||| |||| ||| ||||||||
Sbjct 55852 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 55793
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
||||| || || | || ||| ||| | |||| || ||| |||||
Sbjct 55792 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 55733
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608
|| || || || | || || |||| || || ||| | |||||||| ||||| ||
Sbjct 55732 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 55673
Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668
||||| || || |||| | || || || || | ||| || | | | ||| ||
Sbjct 55672 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 55613
Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728
|| || || | ||||||||| || || || || | |||| || | || || || |||
Sbjct 55612 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 55553
Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788
||||| || || | || | || || || | || |||||||| | |||||||
Sbjct 55552 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 55493
Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848
|| || | || ||| ||| || ||| | |||||| || | |||| || ||
Sbjct 55492 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 55433
Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908
|| || ||||| | ||| ||||| || ||||||| |||| | || |||| || ||||
Sbjct 55432 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 55373
Query 63909 TTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 63968
|| | | | || || || ||| | ||| || || || | | | || ||
Sbjct 55372 GCATGTCTCATTACGATTTCATACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 55313
Query 63969 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTC 64027
|| ||||| |||| | | | ||| || ||||| || | ||| | || || ||||
Sbjct 55312 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 55254
Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|||||| || || |||| || || | || |||||||| || || || |||||
Sbjct 55253 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 55200
>seq537
Length=102077
Score = 116 bits (128), Expect = 5e-21
Identities = 202/293 (69%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 33843 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33902
|| || | ||| |||||||| | ||| || |||| || || |||||||| ||
Sbjct 34664 TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATG 34605
Query 33903 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT 33962
||||| || |||||||| |||| ||||| | | ||| |||||| | || || ||
Sbjct 34604 ATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCG 34545
Query 33963 GCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 34022
| | || ||||| || |||||||| || || || || ||||| || ||| ||
Sbjct 34544 ACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATG 34485
Query 34023 AAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCC 34079
|| ||| ||||| | | | |||| ||| |||| | |||||| || | |||
Sbjct 34484 AAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCA 34425
Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132
|||||||| | |||||||| ||||||||||| || || ||||| | ||||||
Sbjct 34424 ACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 34372
Score = 102 bits (112), Expect = 1e-16
Identities = 293/448 (65%), Gaps = 2/448 (0%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
|||||| || || ||||| ||||| ||||| || || || || ||||| |||||
Sbjct 35287 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 35228
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || ||||||||||| || || |||||| ||||| | ||| ||| ||
Sbjct 35227 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 35168
Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457
|| || | | || ||| || || || || || ||| ||| | | ||
Sbjct 35167 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 35108
Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517
|||||| | ||| ||| ||||| | || || || || || || |||| || ||
Sbjct 35107 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 35048
Query 33518 ATTTGTTATAATAAATCT-AACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| ||| || || ||| ||| | ||| || || | || | || || |
Sbjct 35047 TTCTGTGATGATTT-TCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGA 34989
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || ||||| || ||| | |||||| || | | || | || || ||||| |
Sbjct 34988 GAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGG 34929
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || || ||||| ||||||||||| || ||||| || || || || || ||||| |
Sbjct 34928 TAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGA 34869
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGC 33724
||||||| ||||| || |||||||||||
Sbjct 34868 AGAAGATACCTTCGACAGCAGCAAAGGC 34841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629806830119040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |