Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq302 199 5e-46
seq537 109 7e-19
>seq302
Length=64523
Score = 199 bits (220), Expect = 5e-46
Identities = 582/894 (65%), Gaps = 2/894 (0%)
Strand=Plus/Minus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
|||||||| || || | |||| |||| || || ||||| ||||| | || | |
Sbjct 56092 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 56033
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|| || || | | || || ||||||||||| |||||||| ||||||| || | |||
Sbjct 56032 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 55973
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| ||| | | | | ||| || || || || || ||||| | ||| | | |
Sbjct 55972 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 55913
Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221
||||| |||||| || || | ||| ||||| | |||| || || ||||| ||||||
Sbjct 55912 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 55853
Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281
|| || | |||||| || |||||||| |||| | | ||| |||| ||| || || ||
Sbjct 55852 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 55793
Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341
| ||||| || || | || ||| ||| | |||| || ||| |||||
Sbjct 55792 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 55733
Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401
|| || || || | || || |||| || || ||| | || ||||| ||||||||
Sbjct 55732 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 55673
Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461
|| || || ||| |||| | || || || || | ||| || | | ||| ||
Sbjct 55672 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 55613
Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521
|| || || | ||||||||| || || || || | |||| || | || || || |||
Sbjct 55612 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 55553
Query 66522 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 66581
||||| || || | || | || || || | || |||||||| | |||||||
Sbjct 55552 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 55493
Query 66582 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 66641
|| || | || | | |||| || ||| | |||||| || | |||| || ||
Sbjct 55492 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 55433
Query 66642 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 66701
|| || ||||| | ||| ||||| || ||||||| |||| | ||||||| | ||||
Sbjct 55432 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 55373
Query 66702 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 66761
|| | | | || | || ||| | ||| || || || | | | || ||
Sbjct 55372 GCATGTCTCATTACGATTTCATACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 55313
Query 66762 TTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTC 66820
|| |||||| |||| | | | ||| || ||||| || | ||| | || || ||||
Sbjct 55312 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 55254
Query 66821 TTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
||||| || || ||||| || || | ||| |||| ||| || || || |||||
Sbjct 55253 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 55200
>seq537
Length=102077
Score = 109 bits (120), Expect = 7e-19
Identities = 295/451 (65%), Gaps = 8/451 (2%)
Strand=Plus/Minus
Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913
|||||| || || ||||| ||||| ||||| || || || || ||||| || ||
Sbjct 35287 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 35228
Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973
| || || || ||||||||||||||||| ||| || || || | ||| ||| ||
Sbjct 35227 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 35168
Query 35974 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 36033
|| || | | || ||| || ||||| || || ||| ||| | | ||
Sbjct 35167 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 35108
Query 36034 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 36093
|||||| | |||| ||| ||||| | || || || || || || || | ||| ||
Sbjct 35107 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 35048
Query 36094 GTCTGTTATAATAGATATT----ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA 36149
||||| || ||| || || | ||| || || | | | || |
Sbjct 35047 TTCTGTGAT----GATTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGA 34992
Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209
| | | || ||||| || ||||| |||||| || | | || | || |||||||
Sbjct 34991 AGAGAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAA 34932
Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269
| || || || ||||| ||||||||||| || ||||| || || |||||||| ||||||
Sbjct 34931 AGGTAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCAC 34872
Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||| || ||||| || || ||||||||
Sbjct 34871 TGAAGAAGATACCTTCGACAGCAGCAAAGGC 34841
Score = 98.7 bits (108), Expect = 1e-15
Identities = 198/293 (68%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 36419 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 36478
|| || | ||| ||||| || | ||| || |||| || || |||||||| ||
Sbjct 34664 TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATG 34605
Query 36479 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 36538
|| || || |||||||| |||| ||||| | | ||| |||||| | || || ||
Sbjct 34604 ATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCG 34545
Query 36539 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 36598
| | || ||||| || ||||| || || || || || ||||| || ||| ||
Sbjct 34544 ACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATG 34485
Query 36599 AAATATTTTTCGTTTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCC 36655
|| ||| |||| | | | |||| ||| |||| | |||||| || | |||
Sbjct 34484 AAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCA 34425
Query 36656 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708
|||||||| | |||||||| ||||||||||| || || ||||| | ||||||
Sbjct 34424 ACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 34372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658161545245120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |