Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq537 118 8e-22 >seq537 Length=102077 Score = 118 bits (130), Expect = 8e-22 Identities = 294/443 (66%), Gaps = 4/443 (1%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | |||||||| ||||| ||||| || | || ||| || |||||| | || Sbjct 34832 CGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTTTGCGTCAATC 34891 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||||||||| ||| || |||||||| | | |||||||| ||| | || Sbjct 34892 TTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATGAGCTTATCTCT 34951 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 ||||| || ||| ||||| |||||| || || | || || || || || Sbjct 34952 CGTGATGAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTCTCACCTGCGCCACCGC 35011 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 || | | || | || || ||||||| | || || || | ||| ||| || ||| Sbjct 35012 CCCAGCCCAGAGGCTGTTCAGAAAATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTC 35071 Query 22981 TTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTAC 23040 || ||| || || | || || || ||||| | ||| | | ||| Sbjct 35072 CTCACAGATGCTCTCCCATGCGCACTTCTCGGAATGAACGCCAAGCTCATGTGCCAATAC 35131 Query 23041 ATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTT 23100 || |||||||||| ||||| || |||| ||| ||||| || || | || ||| | Sbjct 35132 ATCGAGTTTGTTGCTGATCGACTCCTCGTTGCTCTGGGCAATAAGAAAGTCTACAACTCT 35191 Query 23101 GCCAATCCATTTGATTTCATGGATAACAT-TAGCATTGA-AGGTAAAACAAACTTCTTTG 23158 |||| ||||| ||||||||||| ||||| | || ||| || || || |||||||||| Sbjct 35192 ACCAACCCATTCGATTTCATGGACAACATCTCGC--TGACTGGAAAGACTAACTTCTTTG 35249 Query 23159 AACGCCGTGTGAGTGAATATCAG 23181 | ||||| |||| || ||| Sbjct 35250 AGAAGCGTGTTGGTGACTACCAG 35272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356227660695304