Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq537 118 8e-22
>seq537
Length=102077
Score = 118 bits (130), Expect = 8e-22
Identities = 294/443 (66%), Gaps = 4/443 (1%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|||||| | |||||||| ||||| ||||| || | || ||| || |||||| | ||
Sbjct 34832 CGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTTTGCGTCAATC 34891
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||||||||| ||| || |||||||| | | |||||||| ||| | ||
Sbjct 34892 TTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATGAGCTTATCTCT 34951
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
||||| || ||| ||||| |||||| || || | || || || || ||
Sbjct 34952 CGTGATGAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTCTCACCTGCGCCACCGC 35011
Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980
|| | | || | || || ||||||| | || || || | ||| ||| || |||
Sbjct 35012 CCCAGCCCAGAGGCTGTTCAGAAAATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTC 35071
Query 22981 TTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTAC 23040
|| ||| || || | || || || ||||| | ||| | | |||
Sbjct 35072 CTCACAGATGCTCTCCCATGCGCACTTCTCGGAATGAACGCCAAGCTCATGTGCCAATAC 35131
Query 23041 ATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTT 23100
|| |||||||||| ||||| || |||| ||| ||||| || || | || ||| |
Sbjct 35132 ATCGAGTTTGTTGCTGATCGACTCCTCGTTGCTCTGGGCAATAAGAAAGTCTACAACTCT 35191
Query 23101 GCCAATCCATTTGATTTCATGGATAACAT-TAGCATTGA-AGGTAAAACAAACTTCTTTG 23158
|||| ||||| ||||||||||| ||||| | || ||| || || || ||||||||||
Sbjct 35192 ACCAACCCATTCGATTTCATGGACAACATCTCGC--TGACTGGAAAGACTAACTTCTTTG 35249
Query 23159 AACGCCGTGTGAGTGAATATCAG 23181
| ||||| |||| || |||
Sbjct 35250 AGAAGCGTGTTGGTGACTACCAG 35272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356227660695304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |