Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq302 208 9e-49 seq537 120 4e-22 >seq302 Length=64523 Score = 208 bits (230), Expect = 9e-49 Identities = 584/894 (65%), Gaps = 2/894 (0%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||| || || | |||| |||| || || ||||| ||||| | || | | Sbjct 56092 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 56033 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || || | | || || ||||||||||| |||||||| ||||||| || | ||| Sbjct 56032 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 55973 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| | | | | ||| || || || || || ||||| | ||| | | | Sbjct 55972 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 55913 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 ||||| |||||| || || | ||| ||||| | |||| || || ||||| |||||| Sbjct 55912 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 55853 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | |||||| || |||||||| |||| | | ||| |||| ||| |||||||| Sbjct 55852 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 55793 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497 ||||| || || | || ||| ||| | |||| || ||| ||||| Sbjct 55792 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 55733 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 || || || || | || || |||| || || ||| | |||||||| || ||||| Sbjct 55732 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 55673 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617 ||||| || || |||| | || || || || | ||| || | | ||| || Sbjct 55672 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 55613 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 || || || | ||||||||| || || || || | |||| || | || || || ||| Sbjct 55612 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 55553 Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737 ||||| || || | || | || || || | || |||||||| | ||||||| Sbjct 55552 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 55493 Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63797 || || | || | | |||| || ||| | |||||| || | |||| || || Sbjct 55492 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 55433 Query 63798 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 63857 || || ||||| | ||| ||||| || ||||||| |||| | ||||||| | |||| Sbjct 55432 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 55373 Query 63858 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 63917 || | | | || || || || | ||| || || || | | | || || Sbjct 55372 GCATGTCTCATTACGATTTCATACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 55313 Query 63918 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTC 63976 || ||||| |||| | | | ||| || ||||| || | ||| | || || |||| Sbjct 55312 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 55254 Query 63977 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 |||||| || || ||||| || || | || |||||||| || || || ||||| Sbjct 55253 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 55200 >seq537 Length=102077 Score = 120 bits (132), Expect = 4e-22 Identities = 297/448 (66%), Gaps = 2/448 (0%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 |||||| || || ||||| ||||| ||||| || || || || ||||| ||||| Sbjct 35287 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 35228 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 || || || || ||||||||||| || || |||||| || || | ||| ||| || Sbjct 35227 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 35168 Query 33120 CAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33179 || || | | || ||| || || || || || ||| ||| | | || Sbjct 35167 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 35108 Query 33180 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 33239 |||||| | |||| ||| ||||| | || || || || || || |||| || || Sbjct 35107 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 35048 Query 33240 ATCTGTTATAATAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298 ||||| || || ||| ||| | ||| || || | || | || || | Sbjct 35047 TTCTGTGATGATTT-TCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGA 34989 Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358 | || ||||| || ||| | |||||| || | | || || || |||||||| | Sbjct 34988 GAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGG 34929 Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418 | || || ||||| ||||||||||| || ||||| || || || || || |||||| | Sbjct 34928 TAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGA 34869 Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||||| ||||| || ||||||||||| Sbjct 34868 AGAAGATACCTTCGACAGCAGCAAAGGC 34841 Score = 113 bits (124), Expect = 6e-20 Identities = 201/293 (69%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 || || | ||| |||||||| | ||| || |||| || || |||||||| || Sbjct 34664 TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATG 34605 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684 ||||| || |||||||| |||| ||||| | | ||| |||||| | || || || Sbjct 34604 ATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCG 34545 Query 33685 GCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33744 | | || ||||| || ||||| || || || || || ||||| || ||| || Sbjct 34544 ACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATG 34485 Query 33745 AAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCT 33801 || ||| ||||| | | | |||| ||| |||| | |||||| || | ||| Sbjct 34484 AAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCA 34425 Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854 |||||||| | |||||||| ||||||||||| || || ||||| | |||||| Sbjct 34424 ACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 34372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622936547602880