Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq302 242 1e-58 >seq302 Length=64523 Score = 242 bits (268), Expect = 1e-58 Identities = 479/698 (69%), Gaps = 18/698 (3%) Strand=Plus/Plus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||||| ||||| |||||| || ||| | ||| |||||||| | ||| || Sbjct 55424 TTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGCAAGGTTGCAGA 55483 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 ||||| ||||| ||| | ||||||||||||||||| ||||| | || || || Sbjct 55484 GCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAG 55543 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACA 363567 | ||||| |||||||| || | || || ||| ||||| || ||| | || || Sbjct 55544 AGTCATTGAGACATATAACCTCAT--GTCGCAAAAGTACTTCACTCATGCCTCTCCTACC 55601 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 | | ||| ||||| |||| | || |||||| | || ||||| || | | |||||| Sbjct 55602 CTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAG 55661 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || || ||||||||| || | |||||| || || | ||||||||| ||||| |||| Sbjct 55662 GAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACC 55721 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT---ACATTCG 363743 || || || |||||| | || ||| | |||| || | ||| ||||| Sbjct 55722 GCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTG----GTTCCTACATTGC 55777 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || || | || || || | ||||| ||||| || || || | || ||||| Sbjct 55778 TGGAACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGC 55837 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 || |||||||||||||| || |||||| ||| |||||||| || || || ||||| Sbjct 55838 CAGATACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCC 55897 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||| ||||||||||| || | || |||||||||||| || || || ||| | Sbjct 55898 ATGGCATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGT 55957 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| |||||||| ||| |||||||||| |||| | |||||||| ||||| || Sbjct 55958 TCGTGCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGA 56017 Query 363984 G--GCA-GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 | | | ||| ||| ||| | || || || ||| | ||| ||||| | | ||||| Sbjct 56018 GAAGAATGGT--GAA-TGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGT 56074 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||||| || | | ||||| || || ||||||| Sbjct 56075 CTATGGTGATGAGTTCGAGGCTCTTTATGAGAAGTATG 56112 Score = 107 bits (118), Expect = 5e-18 Identities = 670/1064 (63%), Gaps = 30/1064 (3%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| ||| || | || | || | |||||| || | |||| |||| Sbjct 56205 GCCCAGAAGCTTTGGTATGCTATTCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATG 56264 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||| | |||||| ||| |||||| || |||| || || ||| || || Sbjct 56265 CTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATT-AGAAG 56323 Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | || ||||| |||||||| || |||||| | | || || || ||| || ||||| Sbjct 56324 CTCCAATCTATGCACCGAGATCATCGAATACTGCTCACCTGATGAAGTTGCTGTTTGTAA 56383 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344 | | || || || || | || | || || | | || | || | | | Sbjct 56384 CTTGGCTTCCATTGCCTTACCTACCTTCGTGGATGCTGTGCGTGGAGAATATGATTTTGG 56443 Query 364345 CAT-CTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401 || || | || ||||| | || | | | |||| || ||| | |||||| Sbjct 56444 CAAGCTCCACGAAGTAACTCAAGTCGTCGTTC--GCAACCTTAACAGAATCATCGACCGA 56501 Query 364402 AATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTT 364461 || || |||||| | |||||| | || || | || |||||||| |||| Sbjct 56502 AACTACTATCCAGTCGAGGAAGCCAAACGAAGCAACTTCCGCCATCGCCCAATTGCCTGC 56561 Query 364462 GGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGATGGCATTTGATTCGCCTGA 364520 ||||| ||||| || ||||| | ||| | | | | | | |||||||||| ||||| Sbjct 56562 GGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCTTTGCGACTTC-CATTTGATTCCCCTGA 56620 Query 364521 CGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC 364580 || | |||| | || ||||||||||| || ||| ||||||| || Sbjct 56621 AGCCAAGCAGTTGAATATTCAAATTTTTGAAACAATTTACCACGCCTGTTTGACTGCGTC 56680 Query 364581 GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCA 364640 ||||| | || || | || || || | ||||| || || || | || || Sbjct 56681 CTGTGAGCTAGCTAAGGTTGACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACA 56740 Query 364641 GGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATAC 364700 ||| | | |||| |||| | ||| |||||| || | | | ||| | |||||| | Sbjct 56741 GGGCATCCTTCAGTATGATATGTGGGGTGTCACTCCCACCGATCTCTGGGATTGGGATTC 56800 Query 364701 GCT---ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---TCCCTCGTTACAGCGCC 364754 || || | || |||| ||||| |||||| | || ||| || || Sbjct 56801 TCTGAAACAGGAGATCGCTAAG---CATGGAGTCCGCAACAGTTTGCTTGTT---GCTCC 56854 Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814 |||||| || || ||| ||||| || ||| |||||| ||||||||||| | || Sbjct 56855 CATGCCTACTGCCAGCACTAGCCAGATTCTTGGATTCAACGAATGCTTCGAACCTTACAC 56914 Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874 ||| | || || ||||| || ||| | || || || | | || || || || Sbjct 56915 CTCTAATATCTACTCGCGCCGTGTCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCT 56974 Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 | ||||| || ||| || || ||| |||| ||||||||| || || || Sbjct 56975 TTTGAAGGACCTGGTGGACTTGGGTCTCTGGTCCGACAACATGAAGAATCGAATTATTGC 57034 Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994 | | || || | || |||||||| | ||| | ||| | || | ||||||| Sbjct 57035 AGATGGAGGCTCCATCCAAAACATTCCCAATATCCCACAGGATATCAAAGCACTTTACAA 57094 Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054 |||||| |||||||| || |||||| | || | ||||| |||||||| ||||| || Sbjct 57095 AACCGTCTGGGAAATCTCTCAGCGAACCATTGTTCAGATGGCTGCCGATCGAGGTGCCTT 57154 Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCCAAGCTT 365112 ||| || || || | || |||||| ||| |||| ||| | ||| || Sbjct 57155 CATCGACCAATCTCAATCTCTCAA--TATTCACTTGAAGGAGCCCACCATGGGTAAGATT 57212 Query 365113 ACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || |||||| ||| ||| |||||| ||| | ||||| || Sbjct 57213 ACCAGCATGCACTTCACCGGCTGGAAACTCGGCTTGAAGACTGG 57256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303330755469776