Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq302 242 1e-58
>seq302
Length=64523
Score = 242 bits (268), Expect = 1e-58
Identities = 479/698 (69%), Gaps = 18/698 (3%)
Strand=Plus/Plus
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
|||||||| ||||| |||||| || ||| | ||| |||||||| | ||| ||
Sbjct 55424 TTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGCAAGGTTGCAGA 55483
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
||||| ||||| ||| | ||||||||||||||||| ||||| | || || ||
Sbjct 55484 GCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAG 55543
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACA 363567
| ||||| |||||||| || | || || ||| ||||| || ||| | || ||
Sbjct 55544 AGTCATTGAGACATATAACCTCAT--GTCGCAAAAGTACTTCACTCATGCCTCTCCTACC 55601
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
| | ||| ||||| |||| | || |||||| | || ||||| || | | ||||||
Sbjct 55602 CTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAG 55661
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
|| || ||||||||| || | |||||| || || | ||||||||| ||||| ||||
Sbjct 55662 GAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACC 55721
Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT---ACATTCG 363743
|| || || |||||| | || ||| | |||| || | ||| |||||
Sbjct 55722 GCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTG----GTTCCTACATTGC 55777
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| || || | || || || | ||||| ||||| || || || | || |||||
Sbjct 55778 TGGAACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGC 55837
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
|| |||||||||||||| || |||||| ||| |||||||| || || || |||||
Sbjct 55838 CAGATACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCC 55897
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||| ||||||||||| || | || |||||||||||| || || || ||| |
Sbjct 55898 ATGGCATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGT 55957
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| |||||||| ||| |||||||||| |||| | |||||||| ||||| ||
Sbjct 55958 TCGTGCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGA 56017
Query 363984 G--GCA-GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040
| | | ||| ||| ||| | || || || ||| | ||| ||||| | | |||||
Sbjct 56018 GAAGAATGGT--GAA-TGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGT 56074
Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||||| || | | ||||| || || |||||||
Sbjct 56075 CTATGGTGATGAGTTCGAGGCTCTTTATGAGAAGTATG 56112
Score = 107 bits (118), Expect = 5e-18
Identities = 670/1064 (63%), Gaps = 30/1064 (3%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| |||||||| |||| ||| || | || | || | |||||| || | |||| ||||
Sbjct 56205 GCCCAGAAGCTTTGGTATGCTATTCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATG 56264
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| ||| | |||||| ||| |||||| || |||| || || ||| || ||
Sbjct 56265 CTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATT-AGAAG 56323
Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289
| || ||||| |||||||| || |||||| | | || || || ||| || |||||
Sbjct 56324 CTCCAATCTATGCACCGAGATCATCGAATACTGCTCACCTGATGAAGTTGCTGTTTGTAA 56383
Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344
| | || || || || | || | || || | | || | || | | |
Sbjct 56384 CTTGGCTTCCATTGCCTTACCTACCTTCGTGGATGCTGTGCGTGGAGAATATGATTTTGG 56443
Query 364345 CAT-CTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401
|| || | || ||||| | || | | | |||| || ||| | ||||||
Sbjct 56444 CAAGCTCCACGAAGTAACTCAAGTCGTCGTTC--GCAACCTTAACAGAATCATCGACCGA 56501
Query 364402 AATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTT 364461
|| || |||||| | |||||| | || || | || |||||||| ||||
Sbjct 56502 AACTACTATCCAGTCGAGGAAGCCAAACGAAGCAACTTCCGCCATCGCCCAATTGCCTGC 56561
Query 364462 GGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGATGGCATTTGATTCGCCTGA 364520
||||| ||||| || ||||| | ||| | | | | | | |||||||||| |||||
Sbjct 56562 GGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCTTTGCGACTTC-CATTTGATTCCCCTGA 56620
Query 364521 CGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC 364580
|| | |||| | || ||||||||||| || ||| ||||||| ||
Sbjct 56621 AGCCAAGCAGTTGAATATTCAAATTTTTGAAACAATTTACCACGCCTGTTTGACTGCGTC 56680
Query 364581 GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCA 364640
||||| | || || | || || || | ||||| || || || | || ||
Sbjct 56681 CTGTGAGCTAGCTAAGGTTGACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACA 56740
Query 364641 GGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATAC 364700
||| | | |||| |||| | ||| |||||| || | | | ||| | |||||| |
Sbjct 56741 GGGCATCCTTCAGTATGATATGTGGGGTGTCACTCCCACCGATCTCTGGGATTGGGATTC 56800
Query 364701 GCT---ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---TCCCTCGTTACAGCGCC 364754
|| || | || |||| ||||| |||||| | || ||| || ||
Sbjct 56801 TCTGAAACAGGAGATCGCTAAG---CATGGAGTCCGCAACAGTTTGCTTGTT---GCTCC 56854
Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814
|||||| || || ||| ||||| || ||| |||||| ||||||||||| | ||
Sbjct 56855 CATGCCTACTGCCAGCACTAGCCAGATTCTTGGATTCAACGAATGCTTCGAACCTTACAC 56914
Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874
||| | || || ||||| || ||| | || || || | | || || || ||
Sbjct 56915 CTCTAATATCTACTCGCGCCGTGTCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCT 56974
Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934
| ||||| || ||| || || ||| |||| ||||||||| || || ||
Sbjct 56975 TTTGAAGGACCTGGTGGACTTGGGTCTCTGGTCCGACAACATGAAGAATCGAATTATTGC 57034
Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994
| | || || | || |||||||| | ||| | ||| | || | |||||||
Sbjct 57035 AGATGGAGGCTCCATCCAAAACATTCCCAATATCCCACAGGATATCAAAGCACTTTACAA 57094
Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054
|||||| |||||||| || |||||| | || | ||||| |||||||| ||||| ||
Sbjct 57095 AACCGTCTGGGAAATCTCTCAGCGAACCATTGTTCAGATGGCTGCCGATCGAGGTGCCTT 57154
Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCCAAGCTT 365112
||| || || || | || |||||| ||| |||| ||| | ||| ||
Sbjct 57155 CATCGACCAATCTCAATCTCTCAA--TATTCACTTGAAGGAGCCCACCATGGGTAAGATT 57212
Query 365113 ACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| |||||| ||| ||| |||||| ||| | ||||| ||
Sbjct 57213 ACCAGCATGCACTTCACCGGCTGGAAACTCGGCTTGAAGACTGG 57256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303330755469776
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