Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq725 147 4e-30 seq639 111 3e-19 seq481 84.2 4e-11 >seq725 Length=19491 Score = 147 bits (162), Expect = 4e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || || | |||||||| || |||||||| || || || || ||||| | Sbjct 8398 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 8339 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || || || | |||||| |||||||| || || | || ||||| || | Sbjct 8338 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 8279 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||||||||| || ||||| || || | ||| ||| |||||||| || | ||| || | Sbjct 8278 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCA 8219 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || | ||||||||| || || ||||| || ||||||| Sbjct 8218 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 8180 Score = 136 bits (150), Expect = 7e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || || ||||||||||| || Sbjct 8089 CCGCCACGAAGACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAA 8030 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || |||||||| |||||||| || || | ||| ||||| || ||| Sbjct 8029 AGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGA 7970 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| ||||| || | |||||| ||||| || || | || || ||| Sbjct 7969 ATCCCTTCCTTGTCCTGAATTTTGGACTTGACACTATCGATTGTATCAACCGACTCAACT 7910 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||| || || ||||| || Sbjct 7909 TCGAGGGTTATAGTCTTTCCGGT 7887 >seq639 Length=25736 Score = 111 bits (122), Expect = 3e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || ||||| |||||||| || || | || || || | |||||| || ||||| || Sbjct 21815 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 21874 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || || |||||||| || || |||||||| || || || | ||| || ||| Sbjct 21875 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 21934 Query 68394 ATGGTGTCTGCTG-ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 ||||| || |||| | || || || | ||||||||| || |||||||||||||||||||| Sbjct 21935 ATGGTATC-GCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21993 >seq481 Length=342430 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 225515 AGCCATGCCACGTT-GCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573 |||||| ||| || ||| || |||| ||| ||||| |||||||| ||||| || | ||| Sbjct 302348 AGCCATTTCACATTCGCT-ACATCCAAGTGATTTGTCGGTTCGTCGAGAAGGAGAACGTC 302290 Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633 ||| || || || || |||| |||| ||||||||||||||| || ||||| || || Sbjct 302289 AGCTCTCATAAGCATAGCTCGCGCCAGAGCCAGCTTCATTTTCCATCCACCGGAAAGTGA 302230 Query 225634 GCC 225636 || Sbjct 302229 CCC 302227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921606640256960