Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq725 89.7 4e-13
>seq725
Length=19491
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | || || || ||||| || || |||||
Sbjct 8627 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 8568
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||||| ||| ||||||||||| || ||| | || || ||||| || || ||
Sbjct 8567 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 8508
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|| ||||||||||| || ||| ||||| |||| | | |||| || || | ||
Sbjct 8507 GGGATGCCTTCTTTATCTTGAAT-TTTTGATTTAACATTGTCAATCGTATCTGAACTCTC 8449
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || | || | || || |||||||| ||||| || || || |||||
Sbjct 8448 GACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 8398
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | ||| || || | || || || || ||||| ||||||||
Sbjct 8399 ATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCA 8340
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| || || || || || || ||| |||| || ||||| ||||| |||
Sbjct 8339 GAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGA 8280
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|||||||||||||| || || ||| | ||| | | || | ||| |||| || ||
Sbjct 8279 GGAATGCCTTCTTTATCTTGTAT-TTTCGACTTAACGTTGTCGATGGTATCGGATGACTC 8221
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | ||| | || || ||||| |||||||| ||
Sbjct 8220 CACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 8182
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || || ||||| || | ||| ||| ||| || || ||||||||||| ||
Sbjct 8816 TCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAG 8757
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| ||||| || || ||||| || || ||||| || || || ||| | |||| | |
Sbjct 8756 ATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGGAT-TTTAGATTTAACATT 8698
Query 114312 -TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|||| ||| |||| | || || || | || | |||||||||||||| ||||| ||
Sbjct 8697 ATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAAC 8638
Query 114371 AAAAATCTGCATG 114383
|| || ||||||
Sbjct 8637 GAAGATTTGCATG 8625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420127395309216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |